RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PDGFCQ9NRA1 345 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 TMEM39AQ9NV64 488 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
HDAC1-203ENST00000463172 MYADML2A6NDP7 307 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 GCOM1H8Y6P7 765 aaPredicted RBP15.17■□□□□ 0.02
HDAC1-203ENST00000463172 ARVCFO00192 962 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 SH2B2O14492 632 aaPredicted RBP15.17■□□□□ 0.02
HDAC1-203ENST00000463172 KPNA6O60684 536 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 RAG1P15918 1043 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 BEX3Q00994 111 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 OR6J1Q8NGC5 347 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 PIGSQ96S52 555 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 KIAA1217Q5T5P2 1943 aa15.17■□□□□ 0.02
HDAC1-203ENST00000463172 LTBP2Q14767 1821 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 EIF3JO75822 258 aaKnown RBP15.16■□□□□ 0.02
HDAC1-203ENST00000463172 REC8O95072 547 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
HDAC1-203ENST00000463172 HSD17B4P51659 736 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 SKAP1Q86WV1 359 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 CUL5Q93034 780 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 TAAR1Q96RJ0 339 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 SENP2Q9HC62 589 aa15.16■□□□□ 0.02
HDAC1-203ENST00000463172 KIAA0355O15063 1070 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 FGD1P98174 961 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 GHRHRQ02643 423 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 LRIT3Q3SXY7 679 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 TSGA10IPQ3SY00 556 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 KCNV1Q6PIU1 500 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 CXCL17Q6UXB2 119 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 DHX32Q7L7V1 743 aaKnown RBP15.15■□□□□ 0.02
HDAC1-203ENST00000463172 PXMP2Q9NR77 195 aa15.15■□□□□ 0.02
HDAC1-203ENST00000463172 DDX49Q9Y6V7 483 aaKnown RBP15.15■□□□□ 0.02
HDAC1-203ENST00000463172 CTAGE5O15320 804 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 NR3C2P08235 984 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 EIF2AK2P19525 551 aaKnown RBP15.14■□□□□ 0.01
HDAC1-203ENST00000463172 CDK7P50613 346 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 SGMS1Q86VZ5 419 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 TBC1D5Q92609 795 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 BADQ92934 168 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 RBM28Q9NW13 759 aaKnown RBP15.14■□□□□ 0.01
HDAC1-203ENST00000463172 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
HDAC1-203ENST00000463172 TRIM43BA6NCK2 446 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 CYTH3O43739 400 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 PPP1R11O60927 126 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-203ENST00000463172 GH1P01241 217 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 MYL3P08590 195 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 CCND2P30279 289 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 FPGSQ05932 587 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 FAAP100Q0VG06 881 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 GPR153Q6NV75 609 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 SEPT14Q6ZU15 432 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 FANCBQ8NB91 859 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 TRIM43Q96BQ3 446 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-203ENST00000463172 MTG1Q9BT17 334 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-203ENST00000463172 MYL10Q9BUA6 226 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 PCDH10Q9P2E7 1040 aa15.13■□□□□ 0.01
HDAC1-203ENST00000463172 TIMP1P01033 207 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 SUPT20HL2P0C7V6 817 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 MYCLP12524 364 aaPredicted RBP15.12■□□□□ 0.01
HDAC1-203ENST00000463172 IRX5P78411 483 aaPredicted RBP15.12■□□□□ 0.01
HDAC1-203ENST00000463172 GNPTABQ3T906 1256 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 SH3RF1Q7Z6J0 888 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 MICU3Q86XE3 530 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 TMEM199Q8N511 208 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 SMARCC2Q8TAQ2 1214 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 PDCD2LQ9BRP1 358 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 COL20A1Q9P218 1284 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 MRVI1Q9Y6F6 885 aa15.12■□□□□ 0.01
HDAC1-203ENST00000463172 A6NJR5 290 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 ZBTB43O43298 467 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 EPB41L2O43491 1005 aaKnown RBP15.11■□□□□ 0.01
HDAC1-203ENST00000463172 STAM2O75886 525 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 PSMA5P28066 241 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 HOXA13P31271 388 aaPredicted RBP15.11■□□□□ 0.01
HDAC1-203ENST00000463172 PPIGQ13427 754 aaKnown RBP eCLIP15.11■□□□□ 0.016e-8■■■□□ 18.5
HDAC1-203ENST00000463172 FCHSD1Q86WN1 690 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 FAM126BQ8IXS8 530 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 SLC43A3Q8NBI5 491 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 LRRC2Q9BYS8 371 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
HDAC1-203ENST00000463172 CCDC196A0A1B0GTZ2 297 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 OPLAHO14841 1288 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 TGFB3P10600 412 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 CASTP20810 708 aaKnown RBP15.1■□□□□ 0.01
HDAC1-203ENST00000463172 RCAN1P53805 252 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 PURAQ00577 322 aaKnown RBP15.1■□□□□ 0.01
HDAC1-203ENST00000463172 LAMC2Q13753 1193 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 PGM5Q15124 567 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 MFSD5Q6N075 450 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 CCDC62Q6P9F0 684 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 APOA5Q6Q788 366 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 BLOC1S2Q6QNY1 142 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 TMTC3Q6ZXV5 915 aa15.1■□□□□ 0.01
HDAC1-203ENST00000463172 VSIG10LQ86VR7 867 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms