RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 MOXD2PA6NHM9 499 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 SMPD1P17405 629 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 METAP2P50579 478 aaKnown RBP eCLIP23.66■■□□□ 1.38
SCAF8-204ENST00000461219 HSD17B4P51659 736 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 ACLYP53396 1101 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 GJA9P57773 515 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 RTP1P59025 263 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 APOBRQ0VD83 1088 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 PPP2R5BQ15173 497 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 KCNA10Q16322 511 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 TAPT1Q6NXT6 567 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 SLC39A5Q6ZMH5 540 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 SMARCC2Q8TAQ2 1214 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 SCFD2Q8WU76 684 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 GLT1D1Q96MS3 346 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 STARD7Q9NQZ5 370 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 BRPF3Q9ULD4 1205 aa23.66■■□□□ 1.38
SCAF8-204ENST00000461219 ZMYND8Q9ULU4 1186 aaPredicted RBP23.66■■□□□ 1.38
SCAF8-204ENST00000461219 CCDC196A0A1B0GTZ2 297 aa23.65■■□□□ 1.38
SCAF8-204ENST00000461219 A0A1W2PQ45 241 aaPredicted RBP23.65■■□□□ 1.38
SCAF8-204ENST00000461219 A0A1W2PQY0 241 aa23.65■■□□□ 1.38
SCAF8-204ENST00000461219 ADCY6O43306 1168 aa23.65■■□□□ 1.38
SCAF8-204ENST00000461219 MYCLP12524 364 aaPredicted RBP23.65■■□□□ 1.38
SCAF8-204ENST00000461219 BRDTQ58F21 947 aaPredicted RBP23.65■■□□□ 1.38
SCAF8-204ENST00000461219 UPF3AQ9H1J1 476 aaKnown RBP23.65■■□□□ 1.38
SCAF8-204ENST00000461219 PXMP2Q9NR77 195 aa23.65■■□□□ 1.38
SCAF8-204ENST00000461219 COL20A1Q9P218 1284 aa23.65■■□□□ 1.38
SCAF8-204ENST00000461219 MYADML2A6NDP7 307 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 SYN1P17600 705 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 BEX3Q00994 111 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 TTLL4Q14679 1199 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 FSCN1Q16658 493 aaKnown RBP23.64■■□□□ 1.37
SCAF8-204ENST00000461219 DUSP28Q4G0W2 176 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 SEPT14Q6ZU15 432 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 RUFY3Q7L099 469 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 HEATR3Q7Z4Q2 680 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 KLHDC9Q8NEP7 349 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 Q9Y3F1 56 aa23.64■■□□□ 1.37
SCAF8-204ENST00000461219 hCG_1642624A0A1W2PR95 340 aa23.63■■□□□ 1.37
SCAF8-204ENST00000461219 NKRFO15226 690 aaKnown RBP eCLIP23.63■■□□□ 1.371e-8■□□□□ 9.5
SCAF8-204ENST00000461219 ASGR1P07306 291 aa23.63■■□□□ 1.37
SCAF8-204ENST00000461219 TXNP10599 105 aaKnown RBP23.63■■□□□ 1.37
SCAF8-204ENST00000461219 EDNRBP24530 442 aa23.63■■□□□ 1.37
SCAF8-204ENST00000461219 CST5P28325 142 aaPredicted RBP23.63■■□□□ 1.37
SCAF8-204ENST00000461219 OR6J1Q8NGC5 347 aa23.63■■□□□ 1.37
SCAF8-204ENST00000461219 GNEQ9Y223 722 aaKnown RBP23.63■■□□□ 1.37
SCAF8-204ENST00000461219 OPLAHO14841 1288 aa23.62■■□□□ 1.37
SCAF8-204ENST00000461219 NR3C2P08235 984 aa23.62■■□□□ 1.37
SCAF8-204ENST00000461219 RCAN1P53805 252 aa23.62■■□□□ 1.37
SCAF8-204ENST00000461219 TRIM60Q495X7 471 aa23.62■■□□□ 1.37
SCAF8-204ENST00000461219 CHRDL2Q6WN34 429 aa23.62■■□□□ 1.37
SCAF8-204ENST00000461219 PRDM5Q9NQX1 630 aaPredicted RBP23.62■■□□□ 1.37
SCAF8-204ENST00000461219 EIF3JO75822 258 aaKnown RBP23.61■■□□□ 1.37
SCAF8-204ENST00000461219 CCND2P30279 289 aa23.61■■□□□ 1.37
SCAF8-204ENST00000461219 CPT1AP50416 773 aa23.61■■□□□ 1.37
SCAF8-204ENST00000461219 AKAP17AQ02040 695 aaKnown RBP23.61■■□□□ 1.37
SCAF8-204ENST00000461219 CNTNAP5Q8WYK1 1306 aa23.6■■□□□ 1.37
SCAF8-204ENST00000461219 RBM47A0AV96 593 aaKnown RBP23.6■■□□□ 1.37
SCAF8-204ENST00000461219 IRX5P78411 483 aaPredicted RBP23.6■■□□□ 1.37
SCAF8-204ENST00000461219 GHRHRQ02643 423 aa23.6■■□□□ 1.37
SCAF8-204ENST00000461219 LBHD1Q9BQE6 289 aaPredicted RBP23.6■■□□□ 1.37
SCAF8-204ENST00000461219 PSTPIP2Q9H939 334 aa23.6■■□□□ 1.37
SCAF8-204ENST00000461219 ZSWIM6Q9HCJ5 1215 aa23.6■■□□□ 1.37
SCAF8-204ENST00000461219 DNAH12Q6ZR08 3092 aa23.6■■□□□ 1.37
SCAF8-204ENST00000461219 PQBP1O60828 265 aaKnown RBP23.59■■□□□ 1.37
SCAF8-204ENST00000461219 NAPAP54920 295 aa23.59■■□□□ 1.37
SCAF8-204ENST00000461219 PGM5Q15124 567 aa23.59■■□□□ 1.37
SCAF8-204ENST00000461219 GPKOWQ92917 476 aaPredicted RBP eCLIP23.59■■□□□ 1.37
SCAF8-204ENST00000461219 PDCD2LQ9BRP1 358 aa23.59■■□□□ 1.37
SCAF8-204ENST00000461219 UPF3BQ9BZI7 483 aaKnown RBP23.59■■□□□ 1.37
SCAF8-204ENST00000461219 TM6SF1Q9BZW5 370 aa23.59■■□□□ 1.37
SCAF8-204ENST00000461219 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
SCAF8-204ENST00000461219 MRVI1Q9Y6F6 885 aa23.59■■□□□ 1.37
SCAF8-204ENST00000461219 V9GY48 417 aaPredicted RBP23.59■■□□□ 1.37
SCAF8-204ENST00000461219 MROH7Q68CQ1 1323 aa23.59■■□□□ 1.37
SCAF8-204ENST00000461219 A0A0U1RQG5 324 aaPredicted RBP23.58■■□□□ 1.37
SCAF8-204ENST00000461219 DCDC2CA8MYV0 355 aa23.58■■□□□ 1.37
SCAF8-204ENST00000461219 CABYRO75952 493 aa23.58■■□□□ 1.37
SCAF8-204ENST00000461219 PTGS1P23219 599 aa23.58■■□□□ 1.37
SCAF8-204ENST00000461219 CXCL17Q6UXB2 119 aa23.58■■□□□ 1.37
SCAF8-204ENST00000461219 POLR3EQ9NVU0 708 aa23.58■■□□□ 1.37
SCAF8-204ENST00000461219 COLQQ9Y215 455 aaPredicted RBP23.58■■□□□ 1.37
SCAF8-204ENST00000461219 ELP1O95163 1332 aa23.58■■□□□ 1.36
SCAF8-204ENST00000461219 SPDYE3A6NKU9 549 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 MYL3P08590 195 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 CDC27P30260 824 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 SNX17Q15036 470 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 TMEM63BQ5T3F8 832 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 C1orf53Q5VUE5 145 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 CCSAPQ6IQ19 270 aaPredicted RBP23.57■■□□□ 1.36
SCAF8-204ENST00000461219 USP17L6PQ6QN14 398 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 FBXL16Q8N461 479 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 EHMT1Q9H9B1 1298 aa23.57■■□□□ 1.36
SCAF8-204ENST00000461219 hCG_1984214I3L0E3 225 aa23.56■■□□□ 1.36
SCAF8-204ENST00000461219 GH1P01241 217 aa23.56■■□□□ 1.36
SCAF8-204ENST00000461219 ADD1P35611 737 aaKnown RBP23.56■■□□□ 1.36
SCAF8-204ENST00000461219 TLE2Q04725 743 aa23.56■■□□□ 1.36
SCAF8-204ENST00000461219 LY6KQ17RY6 165 aa23.56■■□□□ 1.36
SCAF8-204ENST00000461219 GNPTABQ3T906 1256 aa23.56■■□□□ 1.36
SCAF8-204ENST00000461219 KCNV1Q6PIU1 500 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms