RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-204ENST00000460035 VPS54Q9P1Q0 977 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 ORC3Q9UBD5 711 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-204ENST00000460035 NRBP1Q9UHY1 535 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 CENPFP49454 3210 aa12.48□□□□□ -0.41
CCDC12-204ENST00000460035 ESYT2A0FGR8 921 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
CCDC12-204ENST00000460035 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
CCDC12-204ENST00000460035 CCND3P30281 292 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-204ENST00000460035 UBE2SQ16763 222 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 TYW1BQ6NUM6 668 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 EEPD1Q7L9B9 569 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 FAM177A1Q8N128 213 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-204ENST00000460035 MORC4Q8TE76 937 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 WASF1Q92558 559 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 GLT8D2Q9H1C3 349 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 C6orf50Q9HD87 102 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 RIC8AQ9NPQ8 531 aa12.47□□□□□ -0.41
CCDC12-204ENST00000460035 ZHX1Q9UKY1 873 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-204ENST00000460035 FRMPD4Q14CM0 1322 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 MEIS2O14770 477 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 JAK2O60674 1132 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 MYCLP12524 364 aaPredicted RBP12.46□□□□□ -0.41
CCDC12-204ENST00000460035 CYBAP13498 195 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 GNA11P29992 359 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 NLRP5P59047 1200 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 ACVR2BQ13705 512 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 NSUN7Q8NE18 718 aaKnown RBP12.46□□□□□ -0.41
CCDC12-204ENST00000460035 TRPV1Q8NER1 839 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 CCDC148Q8NFR7 591 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 TMX3Q96JJ7 454 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 AIFM3Q96NN9 605 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 DEFB118Q96PH6 123 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 IWS1Q96ST2 819 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 LLPHQ9BRT6 129 aaKnown RBP12.46□□□□□ -0.41
CCDC12-204ENST00000460035 ALG1Q9BT22 464 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCDC12-204ENST00000460035 ABHD16BQ9H3Z7 469 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 SH3GLB2Q9NR46 395 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 PXMP2Q9NR77 195 aa12.46□□□□□ -0.41
CCDC12-204ENST00000460035 MYH9P35579 1960 aaKnown RBP12.45□□□□□ -0.42
CCDC12-204ENST00000460035 SPDYE3A6NKU9 549 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
CCDC12-204ENST00000460035 NR3C2P08235 984 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 FDPSP14324 419 aaKnown RBP12.45□□□□□ -0.42
CCDC12-204ENST00000460035 XBP1P17861 261 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 EDNRBP24530 442 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 FOSBP53539 338 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 ZMYND12Q9H0C1 365 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 PCDHA6Q9UN73 950 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 PCDHA8Q9Y5H6 950 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 KAT6AQ92794 2004 aa12.45□□□□□ -0.42
CCDC12-204ENST00000460035 CAPN15O75808 1086 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 GJB1P08034 283 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 ZNF865P0CJ78 1059 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-204ENST00000460035 STXBP2Q15833 593 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 ANO1Q5XXA6 986 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-204ENST00000460035 FAM184AQ8NB25 1140 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 BICD2Q8TD16 824 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 SHISA4Q96DD7 197 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-204ENST00000460035 PDCD2LQ9BRP1 358 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 KATNBL1Q9H079 304 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 EHMT1Q9H9B1 1298 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 PAK6Q9NQU5 681 aaPredicted RBP12.44□□□□□ -0.42
CCDC12-204ENST00000460035 PDGFCQ9NRA1 345 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 TMEM260Q9NX78 707 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 FAM184BQ9ULE4 1060 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 KCNJ14Q9UNX9 436 aa12.44□□□□□ -0.42
CCDC12-204ENST00000460035 SEPT4O43236 478 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 EIF3JO75822 258 aaKnown RBP12.43□□□□□ -0.42
CCDC12-204ENST00000460035 SGPL1O95470 568 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 FOSP01100 380 aaPredicted RBP12.43□□□□□ -0.42
CCDC12-204ENST00000460035 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
CCDC12-204ENST00000460035 CCND2P30279 289 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 SOX10P56693 466 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 HMGN5P82970 282 aaKnown RBP12.43□□□□□ -0.42
CCDC12-204ENST00000460035 TRIM29Q14134 588 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 PGM5Q15124 567 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 CCDC144BQ3MJ40 725 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 SEPT14Q6ZU15 432 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 REXO1Q8N1G1 1221 aaKnown RBP12.43□□□□□ -0.42
CCDC12-204ENST00000460035 U2AF1L4Q8WU68 220 aaKnown RBP12.43□□□□□ -0.42
CCDC12-204ENST00000460035 PGBD1Q96JS3 809 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 VTA1Q9NP79 307 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 GJB4Q9NTQ9 266 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
CCDC12-204ENST00000460035 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 PDE4DIPQ5VU43 2346 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 ALPK3Q96L96 1907 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 MYH15Q9Y2K3 1946 aa12.43□□□□□ -0.42
CCDC12-204ENST00000460035 POTEFA5A3E0 1075 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 ADAMTS3O15072 1205 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 MSCO60682 206 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 RARBP10826 455 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 AKR1A1P14550 325 aa12.42□□□□□ -0.42
CCDC12-204ENST00000460035 CAPN2P17655 700 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms