RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 OR6J1Q8NGC5 347 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 EVI5LQ96CN4 794 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 NECAB3Q96P71 396 aaPredicted RBP14.02□□□□□ -0.17
LMCD1-206ENST00000456506 UHRF1Q96T88 793 aaPredicted RBP14.02□□□□□ -0.17
LMCD1-206ENST00000456506 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
LMCD1-206ENST00000456506 RALGAPA2Q2PPJ7 1873 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 PTPDC1A2A3K4 754 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 NKRFO15226 690 aaKnown RBP eCLIP14.01□□□□□ -0.17
LMCD1-206ENST00000456506 MYL3P08590 195 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 HSPD1P10809 573 aaKnown RBP14.01□□□□□ -0.17
LMCD1-206ENST00000456506 CALML3P27482 149 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 RFC2P35250 354 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 PDE1AP54750 535 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 TAP1Q03518 808 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 PTPN11Q06124 597 aaPredicted RBP14.01□□□□□ -0.17
LMCD1-206ENST00000456506 CCDC62Q6P9F0 684 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 SPRED2Q7Z698 418 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 DEFB128Q7Z7B8 93 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 TBC1D10CQ8IV04 446 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 BRWD1Q9NSI6 2320 aa14.01□□□□□ -0.17
LMCD1-206ENST00000456506 ZBBXA8MT70 800 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 RBAK-RBAKDNI3L0D1 243 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 KCNQ1P51787 676 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 MCMDC2Q4G0Z9 681 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 TMEM67Q5HYA8 995 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 KRT40Q6A162 431 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 TICAM2Q86XR7 235 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 RGS22Q8NE09 1264 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 PHOSPHO2Q8TCD6 241 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 SCFD2Q8WU76 684 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 TTC14Q96N46 770 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 SLC9A7Q96T83 725 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 COL20A1Q9P218 1284 aa14□□□□□ -0.17
LMCD1-206ENST00000456506 NEDD4P46934 1319 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 KPNA6O60684 536 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 LPXNO60711 386 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 ARHGAP1Q07960 439 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 PDE4DQ08499 809 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 PPP2R5BQ15173 497 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
LMCD1-206ENST00000456506 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 HERC6Q8IVU3 1022 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 TBC1D5Q92609 795 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 DHX38Q92620 1227 aaKnown RBP13.99□□□□□ -0.17
LMCD1-206ENST00000456506 KAT2BQ92831 832 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 CPVLQ9H3G5 476 aa13.99□□□□□ -0.17
LMCD1-206ENST00000456506 TXNP10599 105 aaKnown RBP13.98□□□□□ -0.17
LMCD1-206ENST00000456506 HAND2P61296 217 aa13.98□□□□□ -0.17
LMCD1-206ENST00000456506 RBL2Q08999 1139 aa13.98□□□□□ -0.17
LMCD1-206ENST00000456506 NMIQ13287 307 aaPredicted RBP13.98□□□□□ -0.17
LMCD1-206ENST00000456506 TCTN1Q2MV58 587 aa13.98□□□□□ -0.17
LMCD1-206ENST00000456506 FAM47CQ5HY64 1035 aa13.98□□□□□ -0.17
LMCD1-206ENST00000456506 CERS4Q9HA82 394 aa13.98□□□□□ -0.17
LMCD1-206ENST00000456506 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
LMCD1-206ENST00000456506 CCDC171Q6TFL3 1326 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 RAD50Q92878 1312 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 MMP3P08254 477 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 GOLGA8HP0CJ92 632 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 PCP11498 1178 aaKnown RBP13.97□□□□□ -0.17
LMCD1-206ENST00000456506 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 GDF6Q6KF10 455 aaPredicted RBP13.97□□□□□ -0.17
LMCD1-206ENST00000456506 MICALL1Q8N3F8 863 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 ANKS1AQ92625 1134 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 TAAR1Q96RJ0 339 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 MAF1Q9H063 256 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 LOXHD1Q8IVV2 1947 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 KIAA1671Q9BY89 1806 aa13.97□□□□□ -0.17
LMCD1-206ENST00000456506 COL4A6Q14031 1691 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 LCHNA4D1U4 455 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 OPLAHO14841 1288 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 TLL1O43897 1013 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 BAIAP3O94812 1187 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 CXCL10P02778 98 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 ACTN1P12814 892 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 WDR5P61964 334 aaKnown RBP13.96□□□□□ -0.17
LMCD1-206ENST00000456506 GRB10Q13322 594 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
LMCD1-206ENST00000456506 GPATCH4Q5T3I0 446 aaKnown RBP13.96□□□□□ -0.17
LMCD1-206ENST00000456506 TRAF7Q6Q0C0 670 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
LMCD1-206ENST00000456506 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 AFG1LQ8WV93 481 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
LMCD1-206ENST00000456506 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
LMCD1-206ENST00000456506 BAZ2BQ9UIF8 2168 aaKnown RBP13.96□□□□□ -0.18
LMCD1-206ENST00000456506 KAT6AQ92794 2004 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 NBNO60934 754 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 GHRHRQ02643 423 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
LMCD1-206ENST00000456506 BFSP2Q13515 415 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
LMCD1-206ENST00000456506 PTGISQ16647 500 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 LY6KQ17RY6 165 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 TRIM71Q2Q1W2 868 aaKnown RBP13.95□□□□□ -0.18
LMCD1-206ENST00000456506 USH1GQ495M9 461 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 BRDTQ58F21 947 aaPredicted RBP13.95□□□□□ -0.18
LMCD1-206ENST00000456506 MFSD6Q6ZSS7 791 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 TMCO2Q7Z6W1 182 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms