RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 MORF4L1Q9UBU8 362 aa14.25□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PFASO15067 1338 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CYP3A7-CYP3A51PA0A087WV96 503 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 RASSF10A6NK89 507 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CUTAO60888 179 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CYP3A7P24462 503 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ARHGAP4P98171 946 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ARL6IP4Q66PJ3 421 aaKnown RBP14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CYP4F22Q6NT55 531 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ANKRD35Q8N283 1001 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 SYTL5Q8TDW5 730 aaPredicted RBP14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 FERMT2Q96AC1 680 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 TXNRD2Q9NNW7 524 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PCDHA7Q9UN72 937 aa14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 SRPRBQ9Y5M8 271 aaKnown RBP14.24□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MBD3O95983 291 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ALDH1A1P00352 501 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ERCC3P19447 782 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PTPREP23469 700 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MARCKSP29966 332 aaPredicted RBP14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CIITAP33076 1130 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ZNF76P36508 570 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ATP2C1P98194 919 aaPredicted RBP14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 TAF1CQ15572 869 aaPredicted RBP14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 XRRA1Q6P2D8 792 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ANKRD13CQ8N6S4 541 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 KRI1Q8N9T8 703 aaKnown RBP14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CRYGNQ8WXF5 182 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ZFYVE28Q9HCC9 887 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CYP39A1Q9NYL5 469 aa14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 DDX49Q9Y6V7 483 aaKnown RBP14.23□□□□□ -0.13
HLA-DPA1-244ENST00000453337 A0A1W2PQ27 194 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 A0A1W2PQ64 194 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 A0A1W2PQD8 194 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 B4DLN1 442 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 IGF2BP3O00425 579 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 WNT7AO00755 349 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 EDIL3O43854 480 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 NEMFO60524 1076 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 GADD45BO75293 160 aaPredicted RBP14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 FCER1AP12319 257 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PRPHP41219 470 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 GRM1Q13255 1194 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 FAM110CQ1W6H9 321 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ARHGEF16Q5VV41 709 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 C4orf32Q8N8J7 132 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 NSUN6Q8TEA1 469 aaKnown RBP14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CAPNS2Q96L46 248 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 TAAR1Q96RJ0 339 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 RMDN3Q96TC7 470 aa14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 A1CFQ9NQ94 594 aaKnown RBP14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 DDX25Q9UHL0 483 aaKnown RBP14.22□□□□□ -0.13
HLA-DPA1-244ENST00000453337 RPTORQ8N122 1335 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 STRNO43815 780 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 TRAK2O60296 914 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MARCH6O60337 910 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PEX10O60683 326 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CMA1P23946 247 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 KCTD2Q14681 263 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 CALCRLQ16602 461 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 Q4G0T1 1027 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PCNX4Q63HM2 1172 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 SLC30A10Q6XR72 485 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 DTHD1Q6ZMT9 781 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 DNERQ8NFT8 737 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 MBOAT7Q96N66 472 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 IWS1Q96ST2 819 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 PXMP2Q9NR77 195 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 COL20A1Q9P218 1284 aa14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 ADD3Q9UEY8 706 aaKnown RBP14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 FBXO2Q9UK22 296 aaPredicted RBP14.21□□□□□ -0.13
HLA-DPA1-244ENST00000453337 TBX3O15119 743 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CA12O43570 354 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TLR2O60603 784 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TDP2O95551 362 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 OR52Z1P0C646 297 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MAPK4P31152 587 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MAP2K2P36507 400 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 AXDND1Q5T1B0 1012 aaPredicted RBP14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 WDR78Q5VTH9 848 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 NIPA1Q7RTP0 329 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 ABRAQ8N0Z2 381 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MMP19Q99542 508 aa14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MPHOSPH6Q99547 160 aaKnown RBP14.2□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FRMPD4Q14CM0 1322 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 STAM2O75886 525 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 EIF2AK2P19525 551 aaKnown RBP14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CCND2P30279 289 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 LONP1P36776 959 aaKnown RBP14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PGM5Q15124 567 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CEP55Q53EZ4 464 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PRR16Q569H4 304 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 C17orf99Q6UX52 265 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 VSIG10LQ86VR7 867 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SLFN12Q8IYM2 578 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms