RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 KIF28PB7ZC32 967 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 CA3P07451 260 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 PI4K2BQ8TCG2 481 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 ARNTL2Q8WYA1 636 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 NECAB3Q96P71 396 aaPredicted RBP11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 RANBP17Q9H2T7 1088 aaKnown RBP11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 TTC28Q96AY4 2481 aa11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 GREB1LQ9C091 1923 aaPredicted RBP11.37□□□□□ -0.59
SPTLC3-204ENST00000450297 B4DLN1 442 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 KPNA6O60684 536 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 TXNP10599 105 aaKnown RBP11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 PSEN1P49768 467 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 MRPL12P52815 198 aaKnown RBP11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 TFF2Q03403 129 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 VPS53Q5VIR6 699 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 MORC4Q8TE76 937 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 TMEM47Q9BQJ4 181 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 PNMA2Q9UL42 364 aa11.36□□□□□ -0.59
SPTLC3-204ENST00000450297 ORC4O43929 436 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 RFC2P35250 354 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 KCNJ6P48051 423 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 BFSP2Q13515 415 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 USH1GQ495M9 461 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 ANKRD45Q5TZF3 282 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 SCFD2Q8WU76 684 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 COPS5Q92905 334 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 SLC9A7Q96T83 725 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 ZBED2Q9BTP6 218 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 ANAPC4Q9UJX5 808 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 MYH7P12883 1935 aa11.35□□□□□ -0.59
SPTLC3-204ENST00000450297 EYSQ5T1H1 3165 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 LOC102724159A0A0B4J2E5 919 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 RBM47A0AV96 593 aaKnown RBP11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 NKRFO15226 690 aaKnown RBP eCLIP11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 FOXP2O15409 715 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 IQCF3P0C7M6 154 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 BMP1P13497 986 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 KCNQ1P51787 676 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 HAND2P61296 217 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 PWP2Q15269 919 aaKnown RBP11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 PTGISQ16647 500 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 NFRKBQ6P4R8 1299 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 CHST3Q7LGC8 479 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 HERC6Q8IVU3 1022 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 CCDC155Q8N6L0 562 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 CLEC4DQ8WXI8 215 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 HELLSQ9NRZ9 838 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 PCDHB15Q9Y5E8 787 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 MTCH2Q9Y6C9 303 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
SPTLC3-204ENST00000450297 TLL1O43897 1013 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 FGAP02671 866 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 GOLGA8HP0CJ92 632 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 PDHBP11177 359 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 ALX1Q15699 326 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 MCMDC2Q4G0Z9 681 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 KRT40Q6A162 431 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 MFSD6Q6ZSS7 791 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 SEPT14Q6ZU15 432 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 PHOSPHO2Q8TCD6 241 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 FAM122AQ96E09 287 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 FAM227BQ96M60 508 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 C1QTNF1Q9BXJ1 281 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 MYH4Q9Y623 1939 aa11.33□□□□□ -0.6
SPTLC3-204ENST00000450297 VCANP13611 3396 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 A6NJR5 290 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 NOVP48745 357 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 TAP1Q03518 808 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 ZNF543Q08ER8 600 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 PDAP1Q13442 181 aaKnown RBP11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 AFG1LQ8WV93 481 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 VWCEQ96DN2 955 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 COG5Q9UP83 839 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 MCM3APO60318 1980 aa11.32□□□□□ -0.6
SPTLC3-204ENST00000450297 EPOPA6NHQ4 379 aa11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 BAIAP3O94812 1187 aa11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 GH1P01241 217 aa11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 FGRP09769 529 aa11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 TMCO2Q7Z6W1 182 aaPredicted RBP11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
SPTLC3-204ENST00000450297 ESR2Q92731 530 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms