RNA–Protein interactions for RNA: ENST00000448541.1

AC006003.1-201, humanhuman

TSL 4 BASIC

Gene AC006003.1, Length 613 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006003.1-201ENST00000448541 GPHNQ9NQX3 736 aaPredicted RBP17.13■□□□□ 0.33
AC006003.1-201ENST00000448541 RAPGEFL1Q9UHV5 662 aa17.13■□□□□ 0.33
AC006003.1-201ENST00000448541 CCDC171Q6TFL3 1326 aa17.13■□□□□ 0.33
AC006003.1-201ENST00000448541 WDR19Q8NEZ3 1342 aa17.13■□□□□ 0.33
AC006003.1-201ENST00000448541 SCN10AQ9Y5Y9 1956 aa17.13■□□□□ 0.33
AC006003.1-201ENST00000448541 NKRFO15226 690 aaKnown RBP eCLIP17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 TXNP10599 105 aaKnown RBP17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 TFF2Q03403 129 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 NFRKBQ6P4R8 1299 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 DNERQ8NFT8 737 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 TTC14Q96N46 770 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 NECAB3Q96P71 396 aaPredicted RBP17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 CTAGE1Q96RT6 745 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 COL20A1Q9P218 1284 aa17.12■□□□□ 0.33
AC006003.1-201ENST00000448541 COL9A1P20849 921 aa17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 GPNMBQ14956 572 aa17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 KRT40Q6A162 431 aa17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 CCDC62Q6P9F0 684 aa17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
AC006003.1-201ENST00000448541 TANC1Q9C0D5 1861 aa17.1■□□□□ 0.33
AC006003.1-201ENST00000448541 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
AC006003.1-201ENST00000448541 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
AC006003.1-201ENST00000448541 LY6KQ17RY6 165 aa17.1■□□□□ 0.33
AC006003.1-201ENST00000448541 AFG1LQ8WV93 481 aa17.1■□□□□ 0.33
AC006003.1-201ENST00000448541 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
AC006003.1-201ENST00000448541 RAD50Q92878 1312 aa17.1■□□□□ 0.33
AC006003.1-201ENST00000448541 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 KPNA6O60684 536 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 ACTN1P12814 892 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 BMP1P13497 986 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 RFC2P35250 354 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 KCNQ1P51787 676 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 TAP1Q03518 808 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 ARHGAP1Q07960 439 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 CDC37Q16543 378 aaPredicted RBP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 BRDTQ58F21 947 aaPredicted RBP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 GPATCH4Q5T3I0 446 aaKnown RBP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 GDF6Q6KF10 455 aaPredicted RBP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 RGS22Q8NE09 1264 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 SYTL5Q8TDW5 730 aaPredicted RBP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 DHX38Q92620 1227 aaKnown RBP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 KAT2BQ92831 832 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 FTOQ9C0B1 505 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 PNMA2Q9UL42 364 aa17.09■□□□□ 0.33
AC006003.1-201ENST00000448541 MMP3P08254 477 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 PCP11498 1178 aaKnown RBP17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 SDSP20132 328 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 POU3F3P20264 500 aaPredicted RBP17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 TCTN1Q2MV58 587 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 SEPT14Q6ZU15 432 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 TMCO2Q7Z6W1 182 aaPredicted RBP17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 DGKHQ86XP1 1220 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 ADGRF4Q8IZF3 695 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 PNMA1Q8ND90 353 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 PHOSPHO2Q8TCD6 241 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 ESR2Q92731 530 aa17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 MPHOSPH6Q99547 160 aaKnown RBP17.08■□□□□ 0.32
AC006003.1-201ENST00000448541 BFSP2Q13515 415 aa17.07■□□□□ 0.32
AC006003.1-201ENST00000448541 PTGISQ16647 500 aa17.07■□□□□ 0.32
AC006003.1-201ENST00000448541 CHST3Q7LGC8 479 aa17.07■□□□□ 0.32
AC006003.1-201ENST00000448541 TICAM2Q86XR7 235 aa17.07■□□□□ 0.32
AC006003.1-201ENST00000448541 ARNTL2Q8WYA1 636 aa17.07■□□□□ 0.32
AC006003.1-201ENST00000448541 ABCB11O95342 1321 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 LCHNA4D1U4 455 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 ZNF213O14771 459 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 KDM4AO75164 1064 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 SKIV2LQ15477 1246 aaKnown RBP17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 QRICH1Q2TAL8 776 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 SESTD1Q86VW0 696 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 IL27Q8NEV9 243 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 TSPYL2Q9H2G4 693 aaPredicted RBP17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 NOD1Q9Y239 953 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 MYO9BQ13459 2157 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
AC006003.1-201ENST00000448541 B4DLN1 442 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 B4E1Z4 1266 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 LPXNO60711 386 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 GH1P01241 217 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 MRPL12P52815 198 aaKnown RBP17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 DEFB103AP81534 67 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 B4GALNT3Q6L9W6 998 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 ENAHQ8N8S7 591 aaPredicted RBP17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 NSUN6Q8TEA1 469 aaKnown RBP17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 JMJD4Q9H9V9 463 aa17.05■□□□□ 0.32
AC006003.1-201ENST00000448541 TET1Q8NFU7 2136 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms