RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 TRIM58Q8NG06 486 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 MMRN2Q9H8L6 949 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 EHD2Q9NZN4 543 aa18.2■□□□□ 0.5
PBX3-207ENST00000447726 BIN2Q9UBW5 565 aaPredicted RBP18.2■□□□□ 0.5
PBX3-207ENST00000447726 MYMKA6NI61 221 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 MATR3P43243 847 aaKnown RBP eCLIP18.19■□□□□ 0.5
PBX3-207ENST00000447726 SPTY2D1Q68D10 685 aaPredicted RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 CDCA7Q9BWT1 371 aaPredicted RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 TSGA10Q9BZW7 698 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 HNRNPH3P31942 346 aaKnown RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 AMPD3Q01432 767 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 NFRKBQ6P4R8 1299 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 NBPF5PQ86XG9 351 aaPredicted RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 FNBP4Q8N3X1 1017 aaPredicted RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 ANKRD13CQ8N6S4 541 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 BLOC1S4Q9NUP1 217 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 SALL4Q9UJQ4 1053 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 USO1O60763 962 aaKnown RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 TACC1O75410 805 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 SLC7A5Q01650 507 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 GRB10Q13322 594 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 SPATA4Q8NEY3 305 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 AENQ8WTP8 325 aaKnown RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 RRP36Q96EU6 259 aaKnown RBP18.19■□□□□ 0.5
PBX3-207ENST00000447726 SPZ1Q9BXG8 430 aa18.19■□□□□ 0.5
PBX3-207ENST00000447726 IRS2Q9Y4H2 1338 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 SND1Q7KZF4 910 aaKnown RBP eCLIP18.18■□□□□ 0.5
PBX3-207ENST00000447726 RRAGAQ7L523 313 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 PIGSQ96S52 555 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 DEF6Q9H4E7 631 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 C6orf50Q9HD87 102 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 ROBO3Q96MS0 1386 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 LRRC53A6NM62 1247 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 SV2BQ7L1I2 683 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 MMGT1Q8N4V1 131 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 CCDC155Q8N6L0 562 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 GLIS3Q8NEA6 775 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 CALML4Q96GE6 196 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
PBX3-207ENST00000447726 FAM184BQ9ULE4 1060 aa18.18■□□□□ 0.5
PBX3-207ENST00000447726 GOLGA6BA6NDN3 693 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 NCK2O43639 380 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 AKR1B10O60218 316 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 GNA11P29992 359 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 IQCEQ6IPM2 695 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 AMOTL1Q8IY63 956 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 OSBPL9Q96SU4 736 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 UBA5Q9GZZ9 404 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 CASZ1Q86V15 1759 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 TM4SF1P30408 202 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 PPP1R2P41236 205 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 LZTS2Q9BRK4 669 aa18.17■□□□□ 0.5
PBX3-207ENST00000447726 COL16A1Q07092 1604 aaPredicted RBP18.17■□□□□ 0.5
PBX3-207ENST00000447726 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
PBX3-207ENST00000447726 EYA3Q99504 573 aa18.16■□□□□ 0.5
PBX3-207ENST00000447726 NUDT12Q9BQG2 462 aa18.16■□□□□ 0.5
PBX3-207ENST00000447726 MYH10P35580 1976 aa18.16■□□□□ 0.5
PBX3-207ENST00000447726 LRRC41Q15345 812 aa18.16■□□□□ 0.5
PBX3-207ENST00000447726 COBLL1Q53SF7 1204 aa18.16■□□□□ 0.5
PBX3-207ENST00000447726 ANKIB1Q9P2G1 1089 aa18.16■□□□□ 0.5
PBX3-207ENST00000447726 POTEMA6NI47 508 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 PPFIA4O75335 1185 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 BAG3O95817 575 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 CDK8P49336 464 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 GFPT1Q06210 699 aaPredicted RBP18.15■□□□□ 0.5
PBX3-207ENST00000447726 MAN2A1Q16706 1144 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 CCDC70Q6NSX1 233 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 UNC13DQ70J99 1090 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 WDR66Q8TBY9 1149 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 BAP1Q92560 729 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 MTMR9Q96QG7 549 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 STRCQ7RTU9 1775 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 MYH1P12882 1939 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 GOLGA6CA6NDK9 693 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 SLC37A4O43826 429 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 LCA5LO95447 670 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 GOLGA6DP0CG33 693 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 MAGEA1P43355 309 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 REXO1Q8N1G1 1221 aaKnown RBP18.15■□□□□ 0.5
PBX3-207ENST00000447726 LARP4BQ92615 738 aaKnown RBP18.15■□□□□ 0.5
PBX3-207ENST00000447726 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 GOLGA6AQ9NYA3 693 aa18.15■□□□□ 0.5
PBX3-207ENST00000447726 SEC63Q9UGP8 760 aaKnown RBP18.15■□□□□ 0.5
PBX3-207ENST00000447726 EDIL3O43854 480 aa18.14■□□□□ 0.5
PBX3-207ENST00000447726 TDP2O95551 362 aa18.14■□□□□ 0.5
PBX3-207ENST00000447726 LRRC55Q6ZSA7 311 aa18.14■□□□□ 0.5
PBX3-207ENST00000447726 KCNK18Q7Z418 384 aa18.14■□□□□ 0.5
PBX3-207ENST00000447726 FAM76AQ8TAV0 307 aa18.14■□□□□ 0.5
PBX3-207ENST00000447726 MTMR8Q96EF0 704 aa18.14■□□□□ 0.5
PBX3-207ENST00000447726 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
PBX3-207ENST00000447726 BUB1O43683 1085 aa18.14■□□□□ 0.49
PBX3-207ENST00000447726 PRLRP16471 622 aa18.14■□□□□ 0.49
PBX3-207ENST00000447726 PPP4CP60510 307 aa18.14■□□□□ 0.49
PBX3-207ENST00000447726 RASSF7Q02833 373 aa18.14■□□□□ 0.49
PBX3-207ENST00000447726 CALCRLQ16602 461 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms