RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 PNMA2Q9UL42 364 aa14.02□□□□□ -0.17
TNXB-202ENST00000442721 RAD50Q92878 1312 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 RFXAPO00287 272 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 ARHGEF15O94989 841 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 FGAP02671 866 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 IQCF3P0C7M6 154 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 ACTN1P12814 892 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 CALML3P27482 149 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 RPS6P62753 249 aaKnown RBP14.01□□□□□ -0.17
TNXB-202ENST00000442721 TFF2Q03403 129 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 PDE4DQ08499 809 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 BRDTQ58F21 947 aaPredicted RBP14.01□□□□□ -0.17
TNXB-202ENST00000442721 MICALL1Q8N3F8 863 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 SCFD2Q8WU76 684 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 COPS5Q92905 334 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 EVI5LQ96CN4 794 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 NECAB3Q96P71 396 aaPredicted RBP14.01□□□□□ -0.17
TNXB-202ENST00000442721 GPHNQ9NQX3 736 aaPredicted RBP14.01□□□□□ -0.17
TNXB-202ENST00000442721 PTPRSQ13332 1948 aa14.01□□□□□ -0.17
TNXB-202ENST00000442721 TRIP12Q14669 1992 aaPredicted RBP14□□□□□ -0.17
TNXB-202ENST00000442721 KCNQ1P51787 676 aa14□□□□□ -0.17
TNXB-202ENST00000442721 TAP1Q03518 808 aa14□□□□□ -0.17
TNXB-202ENST00000442721 AAK1Q2M2I8 961 aa14□□□□□ -0.17
TNXB-202ENST00000442721 FAM47CQ5HY64 1035 aa14□□□□□ -0.17
TNXB-202ENST00000442721 HERC6Q8IVU3 1022 aa14□□□□□ -0.17
TNXB-202ENST00000442721 PPP1R13LQ8WUF5 828 aa14□□□□□ -0.17
TNXB-202ENST00000442721 CTAGE1Q96RT6 745 aa14□□□□□ -0.17
TNXB-202ENST00000442721 A0A0D9SFI3 127 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
TNXB-202ENST00000442721 BAIAP3O94812 1187 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 ARIH2O95376 493 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 BFSP2Q13515 415 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 CCDC62Q6P9F0 684 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 TICAM2Q86XR7 235 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 RETREG2Q8NC44 543 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 TTC14Q96N46 770 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 MPHOSPH6Q99547 160 aaKnown RBP13.99□□□□□ -0.17
TNXB-202ENST00000442721 MAF1Q9H063 256 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 CERS4Q9HA82 394 aa13.99□□□□□ -0.17
TNXB-202ENST00000442721 TXNP10599 105 aaKnown RBP13.98□□□□□ -0.17
TNXB-202ENST00000442721 HSPD1P10809 573 aaKnown RBP13.98□□□□□ -0.17
TNXB-202ENST00000442721 GPNMBQ14956 572 aa13.98□□□□□ -0.17
TNXB-202ENST00000442721 MCMDC2Q4G0Z9 681 aa13.98□□□□□ -0.17
TNXB-202ENST00000442721 RRP12Q5JTH9 1297 aaKnown RBP13.98□□□□□ -0.17
TNXB-202ENST00000442721 KRT40Q6A162 431 aa13.98□□□□□ -0.17
TNXB-202ENST00000442721 SESTD1Q86VW0 696 aa13.98□□□□□ -0.17
TNXB-202ENST00000442721 FAM227BQ96M60 508 aa13.98□□□□□ -0.17
TNXB-202ENST00000442721 TOMM22Q9NS69 142 aa13.98□□□□□ -0.17
TNXB-202ENST00000442721 COG5Q9UP83 839 aa13.98□□□□□ -0.17
TNXB-202ENST00000442721 COL4A4P53420 1690 aaPredicted RBP13.98□□□□□ -0.17
TNXB-202ENST00000442721 BRWD1Q9NSI6 2320 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 B4DLN1 442 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 KIF28PB7ZC32 967 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 LPXNO60711 386 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 MMP3P08254 477 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 PCP11498 1178 aaKnown RBP13.97□□□□□ -0.17
TNXB-202ENST00000442721 PLA2G5P39877 138 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 MRPL12P52815 198 aaKnown RBP13.97□□□□□ -0.17
TNXB-202ENST00000442721 PDE1AP54750 535 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 RBL2Q08999 1139 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 SKIV2LQ15477 1246 aaKnown RBP13.97□□□□□ -0.17
TNXB-202ENST00000442721 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
TNXB-202ENST00000442721 SPRED2Q7Z698 418 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 ZNF589Q86UQ0 364 aaPredicted RBP13.97□□□□□ -0.17
TNXB-202ENST00000442721 CAGE1Q8TC20 777 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 AFAP1L1Q8TED9 768 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 ARNTL2Q8WYA1 636 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 KAT2BQ92831 832 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 FAM122AQ96E09 287 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 C1QTNF1Q9BXJ1 281 aa13.97□□□□□ -0.17
TNXB-202ENST00000442721 FTOQ9C0B1 505 aaKnown RBP eCLIP13.97□□□□□ -0.17
TNXB-202ENST00000442721 KIAA1217Q5T5P2 1943 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 TLL1O43897 1013 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 HAND2P61296 217 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 ARHGAP1Q07960 439 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 GRB10Q13322 594 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 PTGISQ16647 500 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 GDF6Q6KF10 455 aaPredicted RBP13.96□□□□□ -0.17
TNXB-202ENST00000442721 TBC1D10CQ8IV04 446 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 CCDC155Q8N6L0 562 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 AFG1LQ8WV93 481 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 DHX38Q92620 1227 aaKnown RBP13.96□□□□□ -0.17
TNXB-202ENST00000442721 NOD1Q9Y239 953 aa13.96□□□□□ -0.17
TNXB-202ENST00000442721 GH1P01241 217 aa13.95□□□□□ -0.18
TNXB-202ENST00000442721 CXCL10P02778 98 aa13.95□□□□□ -0.18
TNXB-202ENST00000442721 SELPP16109 830 aa13.95□□□□□ -0.18
TNXB-202ENST00000442721 KCNJ6P48051 423 aa13.95□□□□□ -0.18
TNXB-202ENST00000442721 WDR5P61964 334 aaKnown RBP13.95□□□□□ -0.18
TNXB-202ENST00000442721 NMIQ13287 307 aaPredicted RBP13.95□□□□□ -0.18
TNXB-202ENST00000442721 USH1GQ495M9 461 aa13.95□□□□□ -0.18
TNXB-202ENST00000442721 ANKRD45Q5TZF3 282 aa13.95□□□□□ -0.18
TNXB-202ENST00000442721 SYTL5Q8TDW5 730 aaPredicted RBP13.95□□□□□ -0.18
TNXB-202ENST00000442721 COL20A1Q9P218 1284 aa13.95□□□□□ -0.18
TNXB-202ENST00000442721 NEDD4P46934 1319 aa13.94□□□□□ -0.18
TNXB-202ENST00000442721 CCDC171Q6TFL3 1326 aa13.94□□□□□ -0.18
TNXB-202ENST00000442721 LCHNA4D1U4 455 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms