RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 HOXC6P09630 235 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 PRKCZQ05513 592 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 NPY5RQ15761 445 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 KRT25Q7Z3Z0 450 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 FCHSD1Q86WN1 690 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 DIS3L2Q8IYB7 885 aaKnown RBP12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 TRMT44Q8IYL2 757 aaKnown RBP12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 NSUN6Q8TEA1 469 aaKnown RBP12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 USP6NLQ92738 828 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 RMDN3Q96TC7 470 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 BIN2Q9UBW5 565 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 SRRDQ9UH36 339 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 GJD2Q9UKL4 321 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
HLA-DMB-259ENST00000438510 CCDC194A0A1B0GVG4 234 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 STX6O43752 255 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 COBLO75128 1261 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 SYT1P21579 422 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 FLT3LGP49771 235 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 LBX1P52954 281 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 CNTN2Q02246 1040 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 IRF5Q13568 498 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 ZNF792Q3KQV3 632 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 ARHGEF16Q5VV41 709 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 OTOP1Q7RTM1 612 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 ANO3Q9BYT9 981 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 FOXP1Q9H334 677 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 PXMP2Q9NR77 195 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 COL20A1Q9P218 1284 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 PCDHA6Q9UN73 950 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 TRIM17Q9Y577 477 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 PCDHA8Q9Y5H6 950 aa12.07□□□□□ -0.48
HLA-DMB-259ENST00000438510 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 ASB14A6NK59 587 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 M0R2N6 131 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 CYP2B6P20813 491 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 NONOQ15233 471 aaKnown RBP eCLIP12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 OLFML2BQ68BL8 750 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 RAET1EQ8TD07 263 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 RASGRP4Q8TDF6 673 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 MAML3Q96JK9 1138 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 IPO9Q96P70 1041 aaKnown RBP12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 TAAR1Q96RJ0 339 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 IWS1Q96ST2 819 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 TMEM260Q9NX78 707 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 GABRQQ9UN88 632 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 RPTORQ8N122 1335 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 SYNGAP1Q96PV0 1343 aa12.06□□□□□ -0.48
HLA-DMB-259ENST00000438510 STAM2O75886 525 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 CCND2P30279 289 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 SREBF1P36956 1147 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 CAP1Q01518 475 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 PDE4DQ08499 809 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 NR5A1Q13285 461 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 PGM5Q15124 567 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 XRRA1Q6P2D8 792 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 MAMDC4Q6UXC1 1216 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 CTU1Q7Z7A3 348 aaKnown RBP12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 NOSTRINQ8IVI9 506 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 NPLOC4Q8TAT6 608 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 OXER1Q8TDS5 423 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 PURBQ96QR8 312 aaKnown RBP12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 PDCD2LQ9BRP1 358 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 TINF2Q9BSI4 451 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 PRDM10Q9NQV6 1147 aa12.05□□□□□ -0.48
HLA-DMB-259ENST00000438510 FRMPD3Q5JV73 1810 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 EDNRBP24530 442 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 STXBP2Q15833 593 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 PCNX4Q63HM2 1172 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 PIK3AP1Q6ZUJ8 805 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 BRAPQ7Z569 592 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 MORC4Q8TE76 937 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 PXYLP1Q8TE99 480 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 TBCKQ8TEA7 893 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 FGD4Q96M96 766 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 ZSCAN16Q9H4T2 348 aaPredicted RBP12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 NOL7Q9UMY1 257 aaKnown RBP12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 MTMR6Q9Y217 621 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 ASTN1O14525 1302 aa12.04□□□□□ -0.48
HLA-DMB-259ENST00000438510 KIF28PB7ZC32 967 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 ADAMTS3O15072 1205 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 ADCY3O60266 1144 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 NR3C2P08235 984 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 ZSCAN22P10073 491 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 MYCLP12524 364 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 TRAPPC10P48553 1259 aa12.03□□□□□ -0.48
HLA-DMB-259ENST00000438510 USP11P51784 963 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms