RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
LINC00028-201ENST00000435497 PITPNM1O00562 1244 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 SNHG28P0DPA3 235 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 ACTN1P12814 892 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 RFC2P35250 354 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
LINC00028-201ENST00000435497 ZNF543Q08ER8 600 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 GPNMBQ14956 572 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 PPP2R5BQ15173 497 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 SPRED2Q7Z698 418 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 IL27Q8NEV9 243 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 DNERQ8NFT8 737 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 PHOSPHO2Q8TCD6 241 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 SCFD2Q8WU76 684 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 EVI5LQ96CN4 794 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 CTAGE1Q96RT6 745 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 SLC9A7Q96T83 725 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 PTPRSQ13332 1948 aa16■□□□□ 0.15
LINC00028-201ENST00000435497 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 A0A0D9SFI3 127 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 RBAK-RBAKDNI3L0D1 243 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 KPNA6O60684 536 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 TXNP10599 105 aaKnown RBP15.99■□□□□ 0.15
LINC00028-201ENST00000435497 HSPD1P10809 573 aaKnown RBP15.99■□□□□ 0.15
LINC00028-201ENST00000435497 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
LINC00028-201ENST00000435497 CCDC62Q6P9F0 684 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 HERC6Q8IVU3 1022 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 RETREG2Q8NC44 543 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 TBC1D5Q92609 795 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 TTC14Q96N46 770 aa15.99■□□□□ 0.15
LINC00028-201ENST00000435497 FTOQ9C0B1 505 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC00028-201ENST00000435497 HAND2P61296 217 aa15.98■□□□□ 0.15
LINC00028-201ENST00000435497 SKIV2LQ15477 1246 aaKnown RBP15.98■□□□□ 0.15
LINC00028-201ENST00000435497 MCMDC2Q4G0Z9 681 aa15.98■□□□□ 0.15
LINC00028-201ENST00000435497 ANKRD45Q5TZF3 282 aa15.98■□□□□ 0.15
LINC00028-201ENST00000435497 ZNF589Q86UQ0 364 aaPredicted RBP15.98■□□□□ 0.15
LINC00028-201ENST00000435497 RGS22Q8NE09 1264 aa15.98■□□□□ 0.15
LINC00028-201ENST00000435497 ARNTL2Q8WYA1 636 aa15.98■□□□□ 0.15
LINC00028-201ENST00000435497 CPVLQ9H3G5 476 aa15.98■□□□□ 0.15
LINC00028-201ENST00000435497 PNMA2Q9UL42 364 aa15.98■□□□□ 0.15
LINC00028-201ENST00000435497 TANC1Q9C0D5 1861 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 GTPBP6O43824 516 aaPredicted RBP15.97■□□□□ 0.15
LINC00028-201ENST00000435497 LPXNO60711 386 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 PDE1AP54750 535 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 BFSP2Q13515 415 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 AAK1Q2M2I8 961 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 AFG1LQ8WV93 481 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 KAT2BQ92831 832 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 UBA5Q9GZZ9 404 aa15.97■□□□□ 0.15
LINC00028-201ENST00000435497 RAD50Q92878 1312 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 TLL1O43897 1013 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 GOLGA8HP0CJ92 632 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 CHMP4BP1P59074 171 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 NMIQ13287 307 aaPredicted RBP15.96■□□□□ 0.15
LINC00028-201ENST00000435497 GRB10Q13322 594 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 PTGISQ16647 500 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 LY6KQ17RY6 165 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 TCTN1Q2MV58 587 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 USH1GQ495M9 461 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 GDF6Q6KF10 455 aaPredicted RBP15.96■□□□□ 0.15
LINC00028-201ENST00000435497 TMCO2Q7Z6W1 182 aaPredicted RBP15.96■□□□□ 0.15
LINC00028-201ENST00000435497 TBC1D10CQ8IV04 446 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 DHX38Q92620 1227 aaKnown RBP15.96■□□□□ 0.15
LINC00028-201ENST00000435497 TAAR1Q96RJ0 339 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 MPHOSPH6Q99547 160 aaKnown RBP15.96■□□□□ 0.15
LINC00028-201ENST00000435497 EPHX3Q9H6B9 360 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 COL20A1Q9P218 1284 aa15.96■□□□□ 0.15
LINC00028-201ENST00000435497 ZMYM6O95789 1325 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 LCHNA4D1U4 455 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 KIF28PB7ZC32 967 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 BAIAP3O94812 1187 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 MMP3P08254 477 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 ARHGAP1Q07960 439 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 MFSD6Q6ZSS7 791 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 SESTD1Q86VW0 696 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 SYTL5Q8TDW5 730 aaPredicted RBP15.95■□□□□ 0.14
LINC00028-201ENST00000435497 ZKSCAN3Q9BRR0 538 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 COG5Q9UP83 839 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 NOD1Q9Y239 953 aa15.95■□□□□ 0.14
LINC00028-201ENST00000435497 KIAA1217Q5T5P2 1943 aa15.94■□□□□ 0.14
LINC00028-201ENST00000435497 B4DLN1 442 aa15.94■□□□□ 0.14
LINC00028-201ENST00000435497 MRPL12P52815 198 aaKnown RBP15.94■□□□□ 0.14
LINC00028-201ENST00000435497 WDR5P61964 334 aaKnown RBP15.94■□□□□ 0.14
LINC00028-201ENST00000435497 SEPT14Q6ZU15 432 aa15.94■□□□□ 0.14
LINC00028-201ENST00000435497 CAGE1Q8TC20 777 aa15.94■□□□□ 0.14
LINC00028-201ENST00000435497 AFAP1L1Q8TED9 768 aa15.94■□□□□ 0.14
LINC00028-201ENST00000435497 C1QTNF1Q9BXJ1 281 aa15.94■□□□□ 0.14
LINC00028-201ENST00000435497 NBNO60934 754 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 GH1P01241 217 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 CXCL10P02778 98 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 PCP11498 1178 aaKnown RBP15.93■□□□□ 0.14
LINC00028-201ENST00000435497 SELPP16109 830 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 PLA2G5P39877 138 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 DEFB103AP81534 67 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 RBL2Q08999 1139 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 GPATCH4Q5T3I0 446 aaKnown RBP15.93■□□□□ 0.14
LINC00028-201ENST00000435497 CHST3Q7LGC8 479 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 DGKHQ86XP1 1220 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 TICAM2Q86XR7 235 aa15.93■□□□□ 0.14
LINC00028-201ENST00000435497 HLA-CQ95604 372 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms