RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 CCL23P55773 120 aa17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 GRIN2CQ14957 1233 aa17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 NSUN6Q8TEA1 469 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 COL25A1Q9BXS0 654 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 MRPL11Q9Y3B7 192 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 TNKSO95271 1327 aa17.37■□□□□ 0.37
RPUSD3-208ENST00000433972 A6NJR5 290 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 B4E1Z4 1266 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 TXNP10599 105 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 PDE4AP27815 886 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 RFC2P35250 354 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 TRAF1Q13077 416 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 FAM47CQ5HY64 1035 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 IWS1Q96ST2 819 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 UBA5Q9GZZ9 404 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 SLC28A3Q9HAS3 691 aa17.36■□□□□ 0.37
RPUSD3-208ENST00000433972 ACTN1P12814 892 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 TRDNQ13061 729 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 STXBP2Q15833 593 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 TMEM63BQ5T3F8 832 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 IFIT1BQ5T764 474 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 TTC22Q5TAA0 569 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 OTOP2Q7RTS6 562 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 FBXO11Q86XK2 927 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 ADGRF4Q8IZF3 695 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 ENAHQ8N8S7 591 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 NOD1Q9Y239 953 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 SLC4A7Q9Y6M7 1214 aa17.35■□□□□ 0.37
RPUSD3-208ENST00000433972 PITPNM1O00562 1244 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 PTGS1P23219 599 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 BFSP2Q13515 415 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 UMODL1Q5DID0 1318 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 CCDC155Q8N6L0 562 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 RETREG2Q8NC44 543 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 RUFY2Q8WXA3 655 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 PPP4R2Q9NY27 417 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 EYSQ5T1H1 3165 aa17.34■□□□□ 0.37
RPUSD3-208ENST00000433972 ZBBXA8MT70 800 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 GH1P01241 217 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 PBX2P40425 430 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 NBPF20Q3BBV1 942 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 ARHGEF16Q5VV41 709 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 SAMD3Q8N6K7 520 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 RMDN3Q96TC7 470 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 AMNQ9BXJ7 453 aa17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 TRMT13Q9NUP7 481 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 MAP3K20Q9NYL2 800 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-208ENST00000433972 GRXCR1A8MXD5 290 aa17.32■□□□□ 0.36
RPUSD3-208ENST00000433972 CASTP20810 708 aaKnown RBP17.32■□□□□ 0.36
RPUSD3-208ENST00000433972 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
RPUSD3-208ENST00000433972 SYTL5Q8TDW5 730 aaPredicted RBP17.32■□□□□ 0.36
RPUSD3-208ENST00000433972 SCLYQ96I15 445 aa17.32■□□□□ 0.36
RPUSD3-208ENST00000433972 CXXC1Q9P0U4 656 aaPredicted RBP17.32■□□□□ 0.36
RPUSD3-208ENST00000433972 PCDHA11Q9Y5I1 949 aa17.32■□□□□ 0.36
RPUSD3-208ENST00000433972 ERICH2A1L162 156 aa17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 CYP2C9P11712 490 aa17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 ATP2A2P16615 1042 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 SART3Q15020 963 aaKnown RBP17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 CAGE1Q8TC20 777 aa17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 KATNAL1Q9BW62 490 aa17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 CPVLQ9H3G5 476 aa17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 PRDM12Q9H4Q4 367 aa17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 JMJD4Q9H9V9 463 aa17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 U3KPZ7 1027 aaPredicted RBP17.31■□□□□ 0.36
RPUSD3-208ENST00000433972 LCTP09848 1927 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 PARNO95453 639 aaKnown RBP17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 DGKDQ16760 1214 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 TJAP1Q5JTD0 557 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 PPP2R2DQ66LE6 453 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 KCNV1Q6PIU1 500 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 SEPT14Q6ZU15 432 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 SESTD1Q86VW0 696 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 PHOSPHO2Q8TCD6 241 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 COPS5Q92905 334 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 TAAR1Q96RJ0 339 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 SLC9A7Q96T83 725 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 NKX2-4Q9H2Z4 354 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 VAT1LQ9HCJ6 419 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 LAMA4Q16363 1823 aa17.3■□□□□ 0.36
RPUSD3-208ENST00000433972 KLRF2D3W0D1 207 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 ZBTB5O15062 677 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 ARIH2O95376 493 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 CFBP00751 764 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 MMP3P08254 477 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 DEFB128Q7Z7B8 93 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 RALYLQ86SE5 291 aaKnown RBP17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 AFAP1L1Q8TED9 768 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 EMID1Q96A84 441 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 TSPYL2Q9H2G4 693 aaPredicted RBP17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 PXMP2Q9NR77 195 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 CUL9Q8IWT3 2517 aa17.29■□□□□ 0.36
RPUSD3-208ENST00000433972 VCANP13611 3396 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms