RNA–Protein interactions for RNA: ENST00000430877.5

PDCD6IP-204, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-204ENST00000430877 LRCH3Q96II8 777 aa18.81■□□□□ 0.6
PDCD6IP-204ENST00000430877 SENP2Q9HC62 589 aa18.81■□□□□ 0.6
PDCD6IP-204ENST00000430877 TMEM39AQ9NV64 488 aa18.81■□□□□ 0.6
PDCD6IP-204ENST00000430877 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
PDCD6IP-204ENST00000430877 PNMA6FA0A0J9YX94 578 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 A6NJR5 290 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 TLR3O15455 904 aaKnown RBP18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 KPNA6O60684 536 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 TIMP1P01033 207 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 RAG1P15918 1043 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 BEX3Q00994 111 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 TTLL4Q14679 1199 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 RNF20Q5VTR2 975 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 CREB3L3Q68CJ9 461 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 CXCL17Q6UXB2 119 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 ZNF654Q8IZM8 581 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 RMDN3Q96TC7 470 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 LZTS2Q9BRK4 669 aa18.8■□□□□ 0.6
PDCD6IP-204ENST00000430877 GRIN2DO15399 1336 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 FRMPD4Q14CM0 1322 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 SH2B2O14492 632 aaPredicted RBP18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 PRC1O43663 620 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 KIF5BP33176 963 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 PURAQ00577 322 aaKnown RBP18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 ITGA7Q13683 1181 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 STXBP2Q15833 593 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 SGMS1Q86VZ5 419 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 TBC1D5Q92609 795 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 EMID1Q96A84 441 aaPredicted RBP18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 TAAR1Q96RJ0 339 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 PXMP2Q9NR77 195 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 PCDHA1Q9Y5I3 950 aa18.79■□□□□ 0.6
PDCD6IP-204ENST00000430877 TANC1Q9C0D5 1861 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 CDC45O75419 566 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 CALM1P0DP23 149 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 CALM2P0DP24 149 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 CALM3P0DP25 149 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 GNAQP50148 359 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 FPGSQ05932 587 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 TMEM63BQ5T3F8 832 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 MFSD5Q6N075 450 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 VAT1LQ9HCJ6 419 aa18.78■□□□□ 0.6
PDCD6IP-204ENST00000430877 CDH23Q9H251 3354 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 MYH7BA7E2Y1 1941 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 EIF3JO75822 258 aaKnown RBP18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 CHST3Q7LGC8 479 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 TEX2Q8IWB9 1127 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 OR6J1Q8NGC5 347 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 PIGSQ96S52 555 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 PDCD2LQ9BRP1 358 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 COL6A3P12111 3177 aa18.77■□□□□ 0.6
PDCD6IP-204ENST00000430877 ARIH2O95376 493 aa18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 CFBP00751 764 aa18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 NR3C2P08235 984 aa18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 TXNP10599 105 aaKnown RBP18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 SMAD3P84022 425 aaKnown RBP18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 PTPN11Q06124 597 aaPredicted RBP18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 SHHQ15465 462 aa18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 NFRKBQ6P4R8 1299 aa18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 KCNV1Q6PIU1 500 aa18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 MTG1Q9BT17 334 aaPredicted RBP18.76■□□□□ 0.59
PDCD6IP-204ENST00000430877 HOXD8P13378 290 aaPredicted RBP18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 PTGS1P23219 599 aa18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 RCAN1P53805 252 aa18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 PPIGQ13427 754 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 C9orf50Q5SZB4 431 aa18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 ARHGEF16Q5VV41 709 aa18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 HOMER1Q86YM7 354 aa18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 KCNB2Q92953 911 aa18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 ALDH8A1Q9H2A2 487 aaPredicted RBP18.75■□□□□ 0.59
PDCD6IP-204ENST00000430877 TMEM265A0A087WTH1 108 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 GCOM1H8Y6P7 765 aaPredicted RBP18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 PIK3CDO00329 1044 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 EPB41L2O43491 1005 aaKnown RBP18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 STAM2O75886 525 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 GH1P01241 217 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 POLR2MP0CAP2 368 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 TGFB3P10600 412 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 ARHGAP1Q07960 439 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 KRT32Q14532 448 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 VSIG10LQ86VR7 867 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 SESTD1Q86VW0 696 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 TMEM199Q8N511 208 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 CCDC136Q96JN2 1154 aa18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 DDX41Q9UJV9 622 aaKnown RBP18.74■□□□□ 0.59
PDCD6IP-204ENST00000430877 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 B4GALT4O60513 344 aa18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 SUPT20HL2P0C7V6 817 aa18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 EIF2AK2P19525 551 aaKnown RBP18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 EPHB4P54760 987 aa18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 PGM5Q15124 567 aa18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 RRP36Q96EU6 259 aaKnown RBP18.73■□□□□ 0.59
PDCD6IP-204ENST00000430877 NOC4LQ9BVI4 516 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms