RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RASGRP4Q8TDF6 673 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 NSUN6Q8TEA1 469 aaKnown RBP12.58□□□□□ -0.4
CHD4-202ENST00000430771 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.4
CHD4-202ENST00000430771 SRRDQ9UH36 339 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 RPTORQ8N122 1335 aa12.58□□□□□ -0.4
CHD4-202ENST00000430771 MYH7BA7E2Y1 1941 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 ASB14A6NK59 587 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 PRKCZQ05513 592 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHD4-202ENST00000430771 ZNF792Q3KQV3 632 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 MSL3Q8N5Y2 521 aaKnown RBP12.57□□□□□ -0.4
CHD4-202ENST00000430771 TBC1D5Q92609 795 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 RMDN3Q96TC7 470 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 PXMP2Q9NR77 195 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 COL20A1Q9P218 1284 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 PCDHA6Q9UN73 950 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 TRIM17Q9Y577 477 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 PCDHA8Q9Y5H6 950 aa12.57□□□□□ -0.4
CHD4-202ENST00000430771 BTBD18B2RXH4 712 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 M0R2N6 131 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 COBLO75128 1261 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 XRCC5P13010 732 aaKnown RBP12.56□□□□□ -0.4
CHD4-202ENST00000430771 EIF2AK2P19525 551 aaKnown RBP12.56□□□□□ -0.4
CHD4-202ENST00000430771 CYP2B6P20813 491 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 CCND2P30279 289 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 SREBF1P36956 1147 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 FLT3LGP49771 235 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 CNTN2Q02246 1040 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 NR5A1Q13285 461 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 IRF5Q13568 498 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 OLFML2BQ68BL8 750 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 NOSTRINQ8IVI9 506 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 RAET1EQ8TD07 263 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 OXER1Q8TDS5 423 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 USP6NLQ92738 828 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 MAML3Q96JK9 1138 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 PGBD1Q96JS3 809 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 IWS1Q96ST2 819 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 TMEM260Q9NX78 707 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
CHD4-202ENST00000430771 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
CHD4-202ENST00000430771 MTMR6Q9Y217 621 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 SYNGAP1Q96PV0 1343 aa12.56□□□□□ -0.4
CHD4-202ENST00000430771 STAM2O75886 525 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHD4-202ENST00000430771 LBX1P52954 281 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 NUCB2P80303 420 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 PDE4DQ08499 809 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 PGM5Q15124 567 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 OTOP1Q7RTM1 612 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 NEK8Q86SG6 692 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 TNFRSF25Q93038 417 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 FGD4Q96M96 766 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 TAAR1Q96RJ0 339 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 NAP1L4Q99733 375 aaKnown RBP12.55□□□□□ -0.4
CHD4-202ENST00000430771 PDCD2LQ9BRP1 358 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
CHD4-202ENST00000430771 MCM3APO60318 1980 aa12.55□□□□□ -0.4
CHD4-202ENST00000430771 SOWAHBA6NEL2 793 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 ZSCAN22P10073 491 aaPredicted RBP12.54□□□□□ -0.4
CHD4-202ENST00000430771 EDNRBP24530 442 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 TRAPPC10P48553 1259 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 ARHGAP4P98171 946 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 SETQ01105 290 aaPredicted RBP12.54□□□□□ -0.4
CHD4-202ENST00000430771 INF2Q27J81 1249 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 PCNX4Q63HM2 1172 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 MAMDC4Q6UXC1 1216 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 CTU1Q7Z7A3 348 aaKnown RBP12.54□□□□□ -0.4
CHD4-202ENST00000430771 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 NPLOC4Q8TAT6 608 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 TBCKQ8TEA7 893 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 GABRQQ9UN88 632 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 KIAA1217Q5T5P2 1943 aa12.54□□□□□ -0.4
CHD4-202ENST00000430771 BRD1O95696 1058 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 F13A1P00488 732 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 HMGCRP04035 888 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 NR3C2P08235 984 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 MYCLP12524 364 aaPredicted RBP12.53□□□□□ -0.4
CHD4-202ENST00000430771 GCFC2P16383 781 aaKnown RBP12.53□□□□□ -0.4
CHD4-202ENST00000430771 ZNF76P36508 570 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 UBXN2AP68543 259 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 CAP1Q01518 475 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 ORC2Q13416 577 aaPredicted RBP12.53□□□□□ -0.4
CHD4-202ENST00000430771 STXBP2Q15833 593 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 GNPTABQ3T906 1256 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 MFSD14CQ5VZR4 134 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 MOXD1Q6UVY6 613 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 FERMT3Q86UX7 667 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 MORC4Q8TE76 937 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 PXYLP1Q8TE99 480 aa12.53□□□□□ -0.4
CHD4-202ENST00000430771 PURBQ96QR8 312 aaKnown RBP12.53□□□□□ -0.4
CHD4-202ENST00000430771 VTA1Q9NP79 307 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms