RNA–Protein interactions for RNA: ENST00000428740.5

IMP4-204, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-204ENST00000428740 TBC1D5Q92609 795 aa17.4■□□□□ 0.38
IMP4-204ENST00000428740 TAAR1Q96RJ0 339 aa17.4■□□□□ 0.38
IMP4-204ENST00000428740 LY9Q9HBG7 655 aa17.4■□□□□ 0.38
IMP4-204ENST00000428740 GPHNQ9NQX3 736 aaPredicted RBP17.4■□□□□ 0.38
IMP4-204ENST00000428740 TRIM43BA6NCK2 446 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
IMP4-204ENST00000428740 TXNP10599 105 aaKnown RBP17.39■□□□□ 0.37
IMP4-204ENST00000428740 HSD17B4P51659 736 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 FAAP100Q0VG06 881 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 HOMER1Q86YM7 354 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 BADQ92934 168 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 TRIM43Q96BQ3 446 aaPredicted RBP17.39■□□□□ 0.37
IMP4-204ENST00000428740 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 PIGSQ96S52 555 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 SENP2Q9HC62 589 aa17.39■□□□□ 0.37
IMP4-204ENST00000428740 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
IMP4-204ENST00000428740 SH2B2O14492 632 aaPredicted RBP17.38■□□□□ 0.37
IMP4-204ENST00000428740 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
IMP4-204ENST00000428740 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 ITGA7Q13683 1181 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 CXCL17Q6UXB2 119 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 SH3RF1Q7Z6J0 888 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 SLC43A3Q8NBI5 491 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 OR6J1Q8NGC5 347 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
IMP4-204ENST00000428740 SPZ1Q9BXG8 430 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 SLC12A7Q9Y666 1083 aa17.38■□□□□ 0.37
IMP4-204ENST00000428740 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
IMP4-204ENST00000428740 CYTH3O43739 400 aa17.37■□□□□ 0.37
IMP4-204ENST00000428740 NR3C2P08235 984 aa17.37■□□□□ 0.37
IMP4-204ENST00000428740 IRX5P78411 483 aaPredicted RBP17.37■□□□□ 0.37
IMP4-204ENST00000428740 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
IMP4-204ENST00000428740 KCNV1Q6PIU1 500 aa17.37■□□□□ 0.37
IMP4-204ENST00000428740 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
IMP4-204ENST00000428740 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
IMP4-204ENST00000428740 TIMP1P01033 207 aa17.36■□□□□ 0.37
IMP4-204ENST00000428740 DHX32Q7L7V1 743 aaKnown RBP17.36■□□□□ 0.37
IMP4-204ENST00000428740 SGMS1Q86VZ5 419 aa17.36■□□□□ 0.37
IMP4-204ENST00000428740 SKAP1Q86WV1 359 aa17.36■□□□□ 0.37
IMP4-204ENST00000428740 MTG1Q9BT17 334 aaPredicted RBP17.36■□□□□ 0.37
IMP4-204ENST00000428740 PXMP2Q9NR77 195 aa17.36■□□□□ 0.37
IMP4-204ENST00000428740 COL20A1Q9P218 1284 aa17.36■□□□□ 0.37
IMP4-204ENST00000428740 A6NJR5 290 aa17.35■□□□□ 0.37
IMP4-204ENST00000428740 GH1P01241 217 aa17.35■□□□□ 0.37
IMP4-204ENST00000428740 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
IMP4-204ENST00000428740 CCDC62Q6P9F0 684 aa17.35■□□□□ 0.37
IMP4-204ENST00000428740 SEPT14Q6ZU15 432 aa17.35■□□□□ 0.37
IMP4-204ENST00000428740 FAM126BQ8IXS8 530 aa17.35■□□□□ 0.37
IMP4-204ENST00000428740 FANCBQ8NB91 859 aa17.35■□□□□ 0.37
IMP4-204ENST00000428740 OPLAHO14841 1288 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 REC8O95072 547 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 CD4P01730 458 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 TGFB3P10600 412 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 EIF2AK2P19525 551 aaKnown RBP17.34■□□□□ 0.37
IMP4-204ENST00000428740 EXOSC10Q01780 885 aaKnown RBP17.34■□□□□ 0.37
IMP4-204ENST00000428740 FPGSQ05932 587 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 SLC35G1Q2M3R5 365 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 TMEM63BQ5T3F8 832 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 MFSD5Q6N075 450 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 VSIG10LQ86VR7 867 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 TMEM199Q8N511 208 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 CUL5Q93034 780 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 TBX21Q9UL17 535 aa17.34■□□□□ 0.37
IMP4-204ENST00000428740 MCM3APO60318 1980 aa17.33■□□□□ 0.37
IMP4-204ENST00000428740 EPB41L2O43491 1005 aaKnown RBP17.33■□□□□ 0.36
IMP4-204ENST00000428740 STAM2O75886 525 aa17.33■□□□□ 0.36
IMP4-204ENST00000428740 MYL3P08590 195 aa17.33■□□□□ 0.36
IMP4-204ENST00000428740 PURAQ00577 322 aaKnown RBP17.33■□□□□ 0.36
IMP4-204ENST00000428740 LAMC2Q13753 1193 aa17.33■□□□□ 0.36
IMP4-204ENST00000428740 PDCD2LQ9BRP1 358 aa17.33■□□□□ 0.36
IMP4-204ENST00000428740 MYL10Q9BUA6 226 aa17.33■□□□□ 0.36
IMP4-204ENST00000428740 RBM28Q9NW13 759 aaKnown RBP17.33■□□□□ 0.36
IMP4-204ENST00000428740 SOX1O00570 391 aaPredicted RBP17.32■□□□□ 0.36
IMP4-204ENST00000428740 CASTP20810 708 aaKnown RBP17.32■□□□□ 0.36
IMP4-204ENST00000428740 ITGB8P26012 769 aa17.32■□□□□ 0.36
IMP4-204ENST00000428740 CCND2P30279 289 aa17.32■□□□□ 0.36
IMP4-204ENST00000428740 HOXA13P31271 388 aaPredicted RBP17.32■□□□□ 0.36
IMP4-204ENST00000428740 PTPN11Q06124 597 aaPredicted RBP17.32■□□□□ 0.36
IMP4-204ENST00000428740 PPIGQ13427 754 aaKnown RBP eCLIP17.32■□□□□ 0.365e-8■□□□□ 9.9
IMP4-204ENST00000428740 SHHQ15465 462 aa17.32■□□□□ 0.36
IMP4-204ENST00000428740 FCHSD1Q86WN1 690 aa17.32■□□□□ 0.36
IMP4-204ENST00000428740 SRBD1Q8N5C6 995 aaKnown RBP17.32■□□□□ 0.36
IMP4-204ENST00000428740 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
IMP4-204ENST00000428740 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
IMP4-204ENST00000428740 TRIOBPQ9H2D6 2365 aa17.32■□□□□ 0.36
IMP4-204ENST00000428740 GRIN2DO15399 1336 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 PIK3CDO00329 1044 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
IMP4-204ENST00000428740 FGD1P98174 961 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 PGM5Q15124 567 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 XRRA1Q6P2D8 792 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 NFRKBQ6P4R8 1299 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 SMARCC2Q8TAQ2 1214 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 COPS5Q92905 334 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 KCNB2Q92953 911 aa17.31■□□□□ 0.36
IMP4-204ENST00000428740 EMID1Q96A84 441 aaPredicted RBP17.31■□□□□ 0.36
IMP4-204ENST00000428740 LRCH3Q96II8 777 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms