RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 COL20A1Q9P218 1284 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 COBLO75128 1261 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 ECM2O94769 699 aaPredicted RBP17.61■□□□□ 0.41
COL11A1-204ENST00000427239 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
COL11A1-204ENST00000427239 RGS2P41220 211 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 NONOQ15233 471 aaKnown RBP eCLIP17.61■□□□□ 0.41
COL11A1-204ENST00000427239 ARHGEF16Q5VV41 709 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 BRAPQ7Z569 592 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 ZNF467Q7Z7K2 595 aaPredicted RBP17.61■□□□□ 0.41
COL11A1-204ENST00000427239 RASGRP4Q8TDF6 673 aa17.61■□□□□ 0.41
COL11A1-204ENST00000427239 CIZ1Q9ULV3 898 aaPredicted RBP17.61■□□□□ 0.41
COL11A1-204ENST00000427239 XRCC5P13010 732 aaKnown RBP17.6■□□□□ 0.41
COL11A1-204ENST00000427239 ANO3Q9BYT9 981 aa17.6■□□□□ 0.41
COL11A1-204ENST00000427239 PXMP2Q9NR77 195 aa17.6■□□□□ 0.41
COL11A1-204ENST00000427239 SOWAHBA6NEL2 793 aa17.59■□□□□ 0.41
COL11A1-204ENST00000427239 ASB14A6NK59 587 aa17.59■□□□□ 0.41
COL11A1-204ENST00000427239 CTCFP49711 727 aaPredicted RBP17.59■□□□□ 0.41
COL11A1-204ENST00000427239 USP11P51784 963 aa17.59■□□□□ 0.41
COL11A1-204ENST00000427239 PRMT2P55345 433 aa17.59■□□□□ 0.41
COL11A1-204ENST00000427239 XRRA1Q6P2D8 792 aa17.59■□□□□ 0.41
COL11A1-204ENST00000427239 PIK3AP1Q6ZUJ8 805 aa17.59■□□□□ 0.41
COL11A1-204ENST00000427239 MSL3Q8N5Y2 521 aaKnown RBP17.59■□□□□ 0.41
COL11A1-204ENST00000427239 SRRDQ9UH36 339 aa17.59■□□□□ 0.41
COL11A1-204ENST00000427239 FOXN1O15353 648 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 BRD1O95696 1058 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.41
COL11A1-204ENST00000427239 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.41
COL11A1-204ENST00000427239 SREBF1P36956 1147 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 FLT3LGP49771 235 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 TBCKQ8TEA7 893 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.41
COL11A1-204ENST00000427239 PDCD2LQ9BRP1 358 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 FRMPD4Q14CM0 1322 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 RPTORQ8N122 1335 aa17.58■□□□□ 0.41
COL11A1-204ENST00000427239 KIF28PB7ZC32 967 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 NR3C2P08235 984 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 ALDH5A1P51649 535 aaPredicted RBP17.58■□□□□ 0.4
COL11A1-204ENST00000427239 PKP1Q13835 747 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 VSIG10LQ86VR7 867 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 CRYGNQ8WXF5 182 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 MAML3Q96JK9 1138 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 APBA2Q99767 749 aa17.58■□□□□ 0.4
COL11A1-204ENST00000427239 CYP3A4P08684 503 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 HSPA8P11142 646 aaKnown RBP17.57■□□□□ 0.4
COL11A1-204ENST00000427239 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
COL11A1-204ENST00000427239 CYP2B6P20813 491 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 TRAPPC10P48553 1259 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 CAP1Q01518 475 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 PRKCZQ05513 592 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 IRF5Q13568 498 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 PGM5Q15124 567 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 STXBP2Q15833 593 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 PCNX4Q63HM2 1172 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 TRMT44Q8IYL2 757 aaKnown RBP17.57■□□□□ 0.4
COL11A1-204ENST00000427239 PGBD1Q96JS3 809 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 CHMP5Q9NZZ3 219 aa17.57■□□□□ 0.4
COL11A1-204ENST00000427239 ZNF236Q9UL36 1845 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 STAM2O75886 525 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 F13A1P00488 732 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 EDNRBP24530 442 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 INF2Q27J81 1249 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 RILPL1Q5EBL4 403 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 EARS2Q5JPH6 523 aaKnown RBP17.56■□□□□ 0.4
COL11A1-204ENST00000427239 OLFML2BQ68BL8 750 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 NEK8Q86SG6 692 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 NPLOC4Q8TAT6 608 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 MORC4Q8TE76 937 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 FGD4Q96M96 766 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 NAP1L4Q99733 375 aaKnown RBP17.56■□□□□ 0.4
COL11A1-204ENST00000427239 NOL7Q9UMY1 257 aaKnown RBP17.56■□□□□ 0.4
COL11A1-204ENST00000427239 GABRQQ9UN88 632 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 ZDHHC9Q9Y397 364 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 ASTN1O14525 1302 aa17.56■□□□□ 0.4
COL11A1-204ENST00000427239 EIF3JO75822 258 aaKnown RBP17.55■□□□□ 0.4
COL11A1-204ENST00000427239 CCND2P30279 289 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 PDE4DQ08499 809 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 RESTQ13127 1097 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 TINF2Q9BSI4 451 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 PLXNB2O15031 1838 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
COL11A1-204ENST00000427239 RBBP6Q7Z6E9 1792 aaKnown RBP17.55■□□□□ 0.4
COL11A1-204ENST00000427239 LBX1P52954 281 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 OTOP1Q7RTM1 612 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 SYNGAP1Q96PV0 1343 aa17.55■□□□□ 0.4
COL11A1-204ENST00000427239 MGAMO43451 1857 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 MYCLP12524 364 aaPredicted RBP17.54■□□□□ 0.4
COL11A1-204ENST00000427239 CIITAP33076 1130 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 ZNF76P36508 570 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 UBXN2AP68543 259 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 PPP4R3AQ6IN85 833 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 MOXD1Q6UVY6 613 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 RAET1EQ8TD07 263 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 PXYLP1Q8TE99 480 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 DOCK3Q8IZD9 2030 aa17.54■□□□□ 0.4
COL11A1-204ENST00000427239 CYP3A7-CYP3A51PA0A087WV96 503 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms