RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 SCN10AQ9Y5Y9 1956 aa13.81□□□□□ -0.2
PLOD3-204ENST00000424135 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
PLOD3-204ENST00000424135 A6NJR5 290 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 IQCF3P0C7M6 154 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 SNHG28P0DPA3 235 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 CPT1AP50416 773 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 CHMP4BP1P59074 171 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 PDE4DQ08499 809 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 USH1GQ495M9 461 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 CRBNQ96SW2 442 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 SEZ6LQ9BYH1 1024 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 UBA5Q9GZZ9 404 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 COL20A1Q9P218 1284 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 NEDD4P46934 1319 aa13.8□□□□□ -0.2
PLOD3-204ENST00000424135 TAP1Q03518 808 aa13.79□□□□□ -0.2
PLOD3-204ENST00000424135 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
PLOD3-204ENST00000424135 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
PLOD3-204ENST00000424135 TMEM67Q5HYA8 995 aa13.79□□□□□ -0.2
PLOD3-204ENST00000424135 AFG1LQ8WV93 481 aa13.79□□□□□ -0.2
PLOD3-204ENST00000424135 TAAR1Q96RJ0 339 aa13.79□□□□□ -0.2
PLOD3-204ENST00000424135 LCHNA4D1U4 455 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 TXNP10599 105 aaKnown RBP13.78□□□□□ -0.2
PLOD3-204ENST00000424135 LY6KQ17RY6 165 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 CCDC62Q6P9F0 684 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 HERC6Q8IVU3 1022 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 ARNTL2Q8WYA1 636 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 DHX38Q92620 1227 aaKnown RBP13.78□□□□□ -0.2
PLOD3-204ENST00000424135 KAT2BQ92831 832 aa13.78□□□□□ -0.2
PLOD3-204ENST00000424135 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
PLOD3-204ENST00000424135 LOC102724159A0A0B4J2E5 919 aa13.77□□□□□ -0.21
PLOD3-204ENST00000424135 LPXNO60711 386 aa13.77□□□□□ -0.21
PLOD3-204ENST00000424135 PFKMP08237 780 aa13.77□□□□□ -0.21
PLOD3-204ENST00000424135 ARHGAP1Q07960 439 aa13.77□□□□□ -0.21
PLOD3-204ENST00000424135 PWP2Q15269 919 aaKnown RBP13.77□□□□□ -0.21
PLOD3-204ENST00000424135 SKIV2LQ15477 1246 aaKnown RBP13.77□□□□□ -0.21
PLOD3-204ENST00000424135 GDF6Q6KF10 455 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-204ENST00000424135 CCDC171Q6TFL3 1326 aa13.77□□□□□ -0.21
PLOD3-204ENST00000424135 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.21
PLOD3-204ENST00000424135 WDR19Q8NEZ3 1342 aa13.77□□□□□ -0.21
PLOD3-204ENST00000424135 SYTL5Q8TDW5 730 aaPredicted RBP13.77□□□□□ -0.21
PLOD3-204ENST00000424135 FTOQ9C0B1 505 aaKnown RBP eCLIP13.77□□□□□ -0.21
PLOD3-204ENST00000424135 PTPRSQ13332 1948 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 ZMYM6O95789 1325 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 NKRFO15226 690 aaKnown RBP eCLIP13.76□□□□□ -0.21
PLOD3-204ENST00000424135 POU3F3P20264 500 aaPredicted RBP13.76□□□□□ -0.21
PLOD3-204ENST00000424135 RRP1P56182 461 aaKnown RBP13.76□□□□□ -0.21
PLOD3-204ENST00000424135 MFSD6Q6ZSS7 791 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 CHST3Q7LGC8 479 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 WNT8BQ93098 351 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 TTC14Q96N46 770 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 LNPKQ9C0E8 428 aa13.76□□□□□ -0.21
PLOD3-204ENST00000424135 MMP3P08254 477 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 RFC2P35250 354 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 DEFB103AP81534 67 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 GRB10Q13322 594 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 HIC1Q14526 733 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 CDC37Q16543 378 aaPredicted RBP13.75□□□□□ -0.21
PLOD3-204ENST00000424135 PTGISQ16647 500 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 RETREG2Q8NC44 543 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.21
PLOD3-204ENST00000424135 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 TANC1Q9C0D5 1861 aa13.75□□□□□ -0.21
PLOD3-204ENST00000424135 TRIM6-TRIM34B2RNG4 842 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 OPLAHO14841 1288 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 SORBS3O60504 671 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 KPNA6O60684 536 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 NBNO60934 754 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 ACTN1P12814 892 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 WDR5P61964 334 aaKnown RBP13.74□□□□□ -0.21
PLOD3-204ENST00000424135 ZNF200P98182 395 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-204ENST00000424135 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-204ENST00000424135 BRDTQ58F21 947 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-204ENST00000424135 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 PHOSPHO2Q8TCD6 241 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 RILPL2Q969X0 211 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 NOD1Q9Y239 953 aa13.74□□□□□ -0.21
PLOD3-204ENST00000424135 TRIP12Q14669 1992 aaPredicted RBP13.74□□□□□ -0.21
PLOD3-204ENST00000424135 RAD50Q92878 1312 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 B4E1Z4 1266 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 TLL1O43897 1013 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 KDM4AO75164 1064 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 ZNF286BP0CG31 522 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 EIF2AK2P19525 551 aaKnown RBP13.73□□□□□ -0.21
PLOD3-204ENST00000424135 SDSP20132 328 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 BFSP2Q13515 415 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-204ENST00000424135 MBTPS1Q14703 1052 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 QRICH1Q2TAL8 776 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 TRAF7Q6Q0C0 670 aa13.73□□□□□ -0.21
PLOD3-204ENST00000424135 PNMA1Q8ND90 353 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms