RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 CHST3Q7LGC8 479 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 KBTBD3Q8NAB2 608 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 MORC4Q8TE76 937 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 DHX38Q92620 1227 aaKnown RBP11.09□□□□□ -0.63
LINC01238-201ENST00000416204 CTAGE1Q96RT6 745 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 CRBNQ96SW2 442 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 C17orf80Q9BSJ5 609 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 ZNF287Q9HBT7 754 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 PTPRSQ13332 1948 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 LINC01553A4QN01 128 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
LINC01238-201ENST00000416204 NBNO60934 754 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 BAIAP3O94812 1187 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 ICAM1P05362 532 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 FDX1P10109 184 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 TXNP10599 105 aaKnown RBP11.08□□□□□ -0.64
LINC01238-201ENST00000416204 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC01238-201ENST00000416204 NHLH1Q02575 133 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 PDE4BQ07343 736 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 PPARAQ07869 468 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 NFRKBQ6P4R8 1299 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 AFG1LQ8WV93 481 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 LRRCC1Q9C099 1032 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 ECHDC1Q9NTX5 307 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 ZBTB40Q9NUA8 1239 aa11.08□□□□□ -0.64
LINC01238-201ENST00000416204 TANC1Q9C0D5 1861 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 RBM47A0AV96 593 aaKnown RBP11.07□□□□□ -0.64
LINC01238-201ENST00000416204 SORBS3O60504 671 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 CSPG5O95196 566 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 LEXMQ3ZCV2 418 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 BRDTQ58F21 947 aaPredicted RBP11.07□□□□□ -0.64
LINC01238-201ENST00000416204 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC01238-201ENST00000416204 LRRC8DQ7L1W4 858 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 WNT8BQ93098 351 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 FBXL18Q96ME1 805 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
LINC01238-201ENST00000416204 PHOX2BQ99453 314 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 RAD9AQ99638 391 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 NAPBQ9H115 298 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 RANBP17Q9H2T7 1088 aaKnown RBP11.07□□□□□ -0.64
LINC01238-201ENST00000416204 ADD3Q9UEY8 706 aaKnown RBP11.07□□□□□ -0.64
LINC01238-201ENST00000416204 SYNPO2Q9UMS6 1093 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 USP34Q70CQ2 3546 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 RAD50Q92878 1312 aa11.07□□□□□ -0.64
LINC01238-201ENST00000416204 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.06□□□□□ -0.64
LINC01238-201ENST00000416204 A6NJR5 290 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 CCER2I3L3R5 266 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
LINC01238-201ENST00000416204 GJB5O95377 273 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 SELPP16109 830 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 GNAT2P19087 354 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 ERVK-21P61565 698 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 ZNF200P98182 395 aaPredicted RBP11.06□□□□□ -0.64
LINC01238-201ENST00000416204 CLUL1Q15846 466 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 LY6KQ17RY6 165 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 SYDE2Q5VT97 1194 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 RNF207Q6ZRF8 634 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 SEPT14Q6ZU15 432 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 FBXO22Q8NEZ5 403 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 ALG1Q9BT22 464 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 NACAP1Q9BZK3 213 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 SCN10AQ9Y5Y9 1956 aa11.06□□□□□ -0.64
LINC01238-201ENST00000416204 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
LINC01238-201ENST00000416204 CKBP12277 381 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 RPS6P62753 249 aaKnown RBP11.05□□□□□ -0.64
LINC01238-201ENST00000416204 USH1GQ495M9 461 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 RRP12Q5JTH9 1297 aaKnown RBP11.05□□□□□ -0.64
LINC01238-201ENST00000416204 CCDC155Q8N6L0 562 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 AFAP1L1Q8TED9 768 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 SCFD2Q8WU76 684 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 KAT2BQ92831 832 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 CPVLQ9H3G5 476 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 TOMM22Q9NS69 142 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 HDAC6Q9UBN7 1215 aa11.05□□□□□ -0.64
LINC01238-201ENST00000416204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01238-201ENST00000416204 FOXP2O15409 715 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 DCXO43602 365 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 KPNA6O60684 536 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 PLA2G6O60733 806 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 MMP3P08254 477 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 ZNF286BP0CG31 522 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 ALADP13716 330 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 PTPN11Q06124 597 aaPredicted RBP11.04□□□□□ -0.64
LINC01238-201ENST00000416204 MBTPS1Q14703 1052 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
LINC01238-201ENST00000416204 TCEAL5Q5H9L2 206 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 ZNF618Q5T7W0 954 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 HFE2Q6ZVN8 426 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 MYOCDQ8IZQ8 938 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 DCAF4Q8WV16 495 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 TBC1D5Q92609 795 aa11.04□□□□□ -0.64
LINC01238-201ENST00000416204 LMCD1Q9NZU5 365 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms