RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 FAM177A1Q8N128 213 aaPredicted RBP17.35■□□□□ 0.37
SNRNP27-202ENST00000409116 GLT8D2Q9H1C3 349 aa17.35■□□□□ 0.37
SNRNP27-202ENST00000409116 PXMP2Q9NR77 195 aa17.35■□□□□ 0.37
SNRNP27-202ENST00000409116 MAP3K20Q9NYL2 800 aaKnown RBP17.35■□□□□ 0.37
SNRNP27-202ENST00000409116 PCDHA4Q9UN74 947 aa17.35■□□□□ 0.37
SNRNP27-202ENST00000409116 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
SNRNP27-202ENST00000409116 CYP2C19P33261 490 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 CLK2P49760 499 aaKnown RBP17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 TRIM32Q13049 653 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 ARHGEF16Q5VV41 709 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 OLFML2BQ68BL8 750 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 FBXO46Q6PJ61 603 aaPredicted RBP17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 ZNF467Q7Z7K2 595 aaPredicted RBP17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 BLIDQ8IZY5 108 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 DNERQ8NFT8 737 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 IL31RAQ8NI17 732 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 BICD2Q8TD16 824 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 OXER1Q8TDS5 423 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 SH3TC2Q8TF17 1288 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 TINF2Q9BSI4 451 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 ADD3Q9UEY8 706 aaKnown RBP17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 PCDHA6Q9UN73 950 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 PCDHA8Q9Y5H6 950 aa17.34■□□□□ 0.37
SNRNP27-202ENST00000409116 SPDYE3A6NKU9 549 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 MMP1P03956 469 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 GRK4P32298 578 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 GALNT17Q6IS24 598 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 TRMT44Q8IYL2 757 aaKnown RBP17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 DAGLBQ8NCG7 672 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 SLAIN1Q8ND83 568 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 FBXO18Q8NFZ0 1043 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 NSUN6Q8TEA1 469 aaKnown RBP17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 ANO3Q9BYT9 981 aa17.33■□□□□ 0.36
SNRNP27-202ENST00000409116 RPTORQ8N122 1335 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 M0R2N6 131 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 IGHA2P01877 340 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 HMGCRP04035 888 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 KRT2P35908 639 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 NR5A1Q13285 461 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 PKN2Q16513 984 aaKnown RBP17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 SLC9C1Q4G0N8 1177 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 MAMDC4Q6UXC1 1216 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 TEX2Q8IWB9 1127 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 DIS3L2Q8IYB7 885 aaKnown RBP17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 PXYLP1Q8TE99 480 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 PDCD2LQ9BRP1 358 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 FRMPD4Q14CM0 1322 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 SYNGAP1Q96PV0 1343 aa17.32■□□□□ 0.36
SNRNP27-202ENST00000409116 ASB14A6NK59 587 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 SNAI1O95863 264 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 FOSP01100 380 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 INHAP05111 366 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 NR3C2P08235 984 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 EDNRBP24530 442 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 PDE4DQ08499 809 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 AP3B2Q13367 1082 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 PGM5Q15124 567 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 PRAMEF19Q5SWL8 479 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 MFSD14CQ5VZR4 134 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 BRMS1Q9HCU9 246 aa17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.31■□□□□ 0.36
SNRNP27-202ENST00000409116 BTBD18B2RXH4 712 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 H3BQV1 296 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 EEPD1Q7L9B9 569 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 MSL3Q8N5Y2 521 aaKnown RBP17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 MORC4Q8TE76 937 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 IWS1Q96ST2 819 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 MCM3APO60318 1980 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 LRRC37A2A6NM11 1700 aa17.3■□□□□ 0.36
SNRNP27-202ENST00000409116 FAM205CA6NFA0 338 aa17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 MYCP01106 439 aaPredicted RBP17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 CCND2P30279 289 aa17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 SREBF1P36956 1147 aa17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 CACNB2Q08289 660 aaPredicted RBP17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 COL13A1Q5TAT6 717 aaPredicted RBP17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 FBXO16Q8IX29 292 aaPredicted RBP17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 TRPV1Q8NER1 839 aa17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 TNFRSF25Q93038 417 aa17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 EHMT1Q9H9B1 1298 aa17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
SNRNP27-202ENST00000409116 LOC102724159A0A0B4J2E5 919 aa17.28■□□□□ 0.36
SNRNP27-202ENST00000409116 CCDC194A0A1B0GVG4 234 aa17.28■□□□□ 0.36
SNRNP27-202ENST00000409116 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
SNRNP27-202ENST00000409116 B4DLN1 442 aa17.28■□□□□ 0.36
SNRNP27-202ENST00000409116 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
SNRNP27-202ENST00000409116 PDCP20941 246 aa17.28■□□□□ 0.36
SNRNP27-202ENST00000409116 SYT1P21579 422 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms