RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 GPR153Q6NV75 609 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 CXCL17Q6UXB2 119 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 OR6J1Q8NGC5 347 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 BADQ92934 168 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 TRIM43Q96BQ3 446 aaPredicted RBP21.46■■□□□ 1.03
PTPN18-203ENST00000409022 PIGSQ96S52 555 aa21.46■■□□□ 1.03
PTPN18-203ENST00000409022 SEC63Q9UGP8 760 aaKnown RBP21.46■■□□□ 1.03
PTPN18-203ENST00000409022 SH2B2O14492 632 aaPredicted RBP21.45■■□□□ 1.02
PTPN18-203ENST00000409022 KPNA6O60684 536 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 TXNP10599 105 aaKnown RBP21.45■■□□□ 1.02
PTPN18-203ENST00000409022 CDK7P50613 346 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 IRX5P78411 483 aaPredicted RBP21.45■■□□□ 1.02
PTPN18-203ENST00000409022 GHRHRQ02643 423 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 FAAP100Q0VG06 881 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 KRT32Q14532 448 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 SH3RF1Q7Z6J0 888 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 RRP36Q96EU6 259 aaKnown RBP21.45■■□□□ 1.02
PTPN18-203ENST00000409022 TAAR1Q96RJ0 339 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 SENP2Q9HC62 589 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 SLC12A7Q9Y666 1083 aa21.45■■□□□ 1.02
PTPN18-203ENST00000409022 GCOM1H8Y6P7 765 aaPredicted RBP21.44■■□□□ 1.02
PTPN18-203ENST00000409022 EIF3JO75822 258 aaKnown RBP21.44■■□□□ 1.02
PTPN18-203ENST00000409022 POLR2MP0CAP2 368 aa21.44■■□□□ 1.02
PTPN18-203ENST00000409022 HSD17B4P51659 736 aa21.44■■□□□ 1.02
PTPN18-203ENST00000409022 ITGA7Q13683 1181 aa21.44■■□□□ 1.02
PTPN18-203ENST00000409022 SKAP1Q86WV1 359 aa21.44■■□□□ 1.02
PTPN18-203ENST00000409022 TBC1D5Q92609 795 aa21.44■■□□□ 1.02
PTPN18-203ENST00000409022 NEK1Q96PY6 1258 aa21.44■■□□□ 1.02
PTPN18-203ENST00000409022 SPZ1Q9BXG8 430 aa21.44■■□□□ 1.02
PTPN18-203ENST00000409022 MCM3APO60318 1980 aa21.43■■□□□ 1.02
PTPN18-203ENST00000409022 PXMP2Q9NR77 195 aa21.43■■□□□ 1.02
PTPN18-203ENST00000409022 PPP1R11O60927 126 aaPredicted RBP21.42■■□□□ 1.02
PTPN18-203ENST00000409022 TIMP1P01033 207 aa21.42■■□□□ 1.02
PTPN18-203ENST00000409022 HMGB1P09429 215 aaKnown RBP21.42■■□□□ 1.02
PTPN18-203ENST00000409022 EIF2AK2P19525 551 aaKnown RBP21.42■■□□□ 1.02
PTPN18-203ENST00000409022 FPGSQ05932 587 aa21.42■■□□□ 1.02
PTPN18-203ENST00000409022 SEPT14Q6ZU15 432 aa21.42■■□□□ 1.02
PTPN18-203ENST00000409022 MTG1Q9BT17 334 aaPredicted RBP21.42■■□□□ 1.02
PTPN18-203ENST00000409022 COL20A1Q9P218 1284 aa21.42■■□□□ 1.02
PTPN18-203ENST00000409022 DNAH12Q6ZR08 3092 aa21.42■■□□□ 1.02
PTPN18-203ENST00000409022 CYTH3O43739 400 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 GH1P01241 217 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 NR3C2P08235 984 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 MYL3P08590 195 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 KCNV1Q6PIU1 500 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 FAM126BQ8IXS8 530 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 SLC43A3Q8NBI5 491 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 CUL5Q93034 780 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 TBX21Q9UL17 535 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 LRRC37A2A6NM11 1700 aa21.41■■□□□ 1.02
PTPN18-203ENST00000409022 SOX1O00570 391 aaPredicted RBP21.4■■□□□ 1.02
PTPN18-203ENST00000409022 TSGA10IPQ3SY00 556 aa21.4■■□□□ 1.02
PTPN18-203ENST00000409022 SGMS1Q86VZ5 419 aa21.4■■□□□ 1.02
PTPN18-203ENST00000409022 TMEM199Q8N511 208 aa21.4■■□□□ 1.02
PTPN18-203ENST00000409022 LRCH3Q96II8 777 aa21.4■■□□□ 1.02
PTPN18-203ENST00000409022 MYL10Q9BUA6 226 aa21.4■■□□□ 1.02
PTPN18-203ENST00000409022 A6NJR5 290 aa21.39■■□□□ 1.01
PTPN18-203ENST00000409022 SUPT20HL2P0C7V6 817 aa21.39■■□□□ 1.01
PTPN18-203ENST00000409022 HOXA13P31271 388 aaPredicted RBP21.39■■□□□ 1.01
PTPN18-203ENST00000409022 PURAQ00577 322 aaKnown RBP21.39■■□□□ 1.01
PTPN18-203ENST00000409022 PPIGQ13427 754 aaKnown RBP eCLIP21.39■■□□□ 1.016e-7■■□□□ 14.5
PTPN18-203ENST00000409022 TMEM63BQ5T3F8 832 aa21.39■■□□□ 1.01
PTPN18-203ENST00000409022 MFSD5Q6N075 450 aa21.39■■□□□ 1.01
PTPN18-203ENST00000409022 DHX32Q7L7V1 743 aaKnown RBP21.39■■□□□ 1.01
PTPN18-203ENST00000409022 PIBF1Q8WXW3 757 aa21.39■■□□□ 1.01
PTPN18-203ENST00000409022 PDCD2LQ9BRP1 358 aa21.39■■□□□ 1.01
PTPN18-203ENST00000409022 MRVI1Q9Y6F6 885 aa21.39■■□□□ 1.01
PTPN18-203ENST00000409022 OPLAHO14841 1288 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 REC8O95072 547 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 MYCLP12524 364 aaPredicted RBP21.38■■□□□ 1.01
PTPN18-203ENST00000409022 PTGS1P23219 599 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 CCND2P30279 289 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 FGD1P98174 961 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 SLC35G1Q2M3R5 365 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 CCDC62Q6P9F0 684 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 FCHSD1Q86WN1 690 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 FANCBQ8NB91 859 aa21.38■■□□□ 1.01
PTPN18-203ENST00000409022 RBM28Q9NW13 759 aaKnown RBP21.38■■□□□ 1.01
PTPN18-203ENST00000409022 CD4P01730 458 aa21.37■■□□□ 1.01
PTPN18-203ENST00000409022 ITGB8P26012 769 aa21.37■■□□□ 1.01
PTPN18-203ENST00000409022 SHHQ15465 462 aa21.37■■□□□ 1.01
PTPN18-203ENST00000409022 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
PTPN18-203ENST00000409022 SMARCC2Q8TAQ2 1214 aa21.37■■□□□ 1.01
PTPN18-203ENST00000409022 LRRC2Q9BYS8 371 aa21.37■■□□□ 1.01
PTPN18-203ENST00000409022 LCTP09848 1927 aa21.37■■□□□ 1.01
PTPN18-203ENST00000409022 STAM2O75886 525 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 ARIH2O95376 493 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 CASTP20810 708 aaKnown RBP21.36■■□□□ 1.01
PTPN18-203ENST00000409022 PSMC6P62333 389 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 LAMC2Q13753 1193 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 PGM5Q15124 567 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 GNPTABQ3T906 1256 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 VSIG10LQ86VR7 867 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 MICU3Q86XE3 530 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 COPS5Q92905 334 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 RNPC3Q96LT9 517 aaKnown RBP21.36■■□□□ 1.01
PTPN18-203ENST00000409022 PPP1R12CQ9BZL4 782 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 HIPK3Q9H422 1215 aa21.36■■□□□ 1.01
PTPN18-203ENST00000409022 DDX41Q9UJV9 622 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms