RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 E2F5Q15329 346 aa12.25□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MTA3Q9BTC8 594 aa12.25□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CARD10Q9BWT7 1032 aa12.25□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CDHR2Q9BYE9 1310 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 TULP2O00295 520 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 KIF4AO95239 1232 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MYL1P05976 194 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 APBA1Q02410 837 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 STK4Q13043 487 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SF3B2Q13435 895 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SEPT7Q16181 437 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 DDB1Q16531 1140 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 EYA3Q99504 573 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 RASAL2Q9UJF2 1139 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 FRMPD2Q68DX3 1309 aaPredicted RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PALMO75781 387 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 FLOT1O75955 427 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SRGNP10124 158 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ADCY7P51828 1080 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 RPS8P62241 208 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SPATS2Q86XZ4 545 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ERMNQ8TAM6 284 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 U2AF1L4Q8WU68 220 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PAIP2Q9BPZ3 127 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 AP1M1Q9BXS5 423 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 NSRP1Q9H0G5 558 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CLNS1AP54105 237 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 HSPA2P54652 639 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 UBE4AQ14139 1066 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 STAG2Q8N3U4 1231 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 AK8Q96MA6 479 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 KCNK9Q9NPC2 374 aa12.24□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PNPLA7Q6ZV29 1317 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 FOXP2O15409 715 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MECOMQ03112 1051 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PPP1R7Q15435 360 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 USP17L2Q6R6M4 530 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PANK4Q9NVE7 773 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PLAAQ9Y263 795 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 OVOS2A0A0G2JMS6 1433 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 FANCGO15287 622 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 EIF3HO15372 352 aaKnown RBP eCLIP12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CCDC172P0C7W6 258 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PRDX5P30044 214 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MRPL12P52815 198 aaKnown RBP12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 HERVK_113P62684 666 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 FKBP3Q00688 224 aaKnown RBP12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ADAM9Q13443 819 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 GKAP1Q5VSY0 366 aaPredicted RBP12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ANKRD2Q9GZV1 360 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 EHD4Q9H223 541 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 TMEM60Q9H2L4 133 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MAGEF1Q9HAY2 307 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CALRP27797 417 aaKnown RBP12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PLS1Q14651 629 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 GALNT17Q6IS24 598 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PACS2Q86VP3 889 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 GPBP1Q86WP2 473 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 FAM53CQ9NYF3 392 aa12.23□□□□□ -0.45
CSGALNACT1-202ENST00000397998 RNF225M0QZC1 329 aaPredicted RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 LAD1O00515 517 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SLC1A4P43007 532 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MTMR3Q13615 1198 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ZNF512BQ96KM6 892 aaPredicted RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 MTRF1LQ9UGC7 380 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PCDHA12Q9UN75 941 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 LOC102724159A0A0B4J2E5 919 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 BACH1O14867 736 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PWP2Q15269 919 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 RPGRQ92834 1020 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 RBM12Q9NTZ6 932 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CAPN6Q9Y6Q1 641 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SMIM22K7EJ46 135 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 EPB41P11171 864 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 PMS1P54277 932 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CETN1Q12798 172 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 TROAPQ12815 778 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SLF2Q8IX21 1173 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SLC44A5Q8NCS7 719 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ARL8AQ96BM9 186 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 TRIM9Q9C026 710 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 DCP1AQ9NPI6 582 aaPredicted RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 COL4A3BPQ9Y5P4 624 aa12.22□□□□□ -0.45
CSGALNACT1-202ENST00000397998 FRMD3A2A2Y4 597 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 H2AFZP0C0S5 128 aa12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 RPL13P26373 211 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 CARSP49589 748 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-202ENST00000397998 KCNB1Q14721 858 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms