RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CCDC194A0A1B0GVG4 234 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 KIF28PB7ZC32 967 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 DDIT3P35638 169 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 PKP1Q13835 747 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 ARHGEF6Q15052 776 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 TNFRSF25Q93038 417 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 RMDN3Q96TC7 470 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 EHMT1Q9H9B1 1298 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 SLC5A4Q9NY91 659 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 GJD2Q9UKL4 321 aa26.98■■□□□ 1.91
TSPAN4-203ENST00000397397 SOWAHBA6NEL2 793 aa26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 CAPN15O75808 1086 aa26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 ZNF792Q3KQV3 632 aa26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 FOXD4L5Q5VV16 416 aaPredicted RBP26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 PIK3AP1Q6ZUJ8 805 aa26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 FERMT3Q86UX7 667 aa26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 FOXD4L4Q8WXT5 416 aaPredicted RBP26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 ADD3Q9UEY8 706 aaKnown RBP26.97■■□□□ 1.91
TSPAN4-203ENST00000397397 ZSCAN22P10073 491 aaPredicted RBP26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 U2AF2P26368 475 aaKnown RBP eCLIP26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 HOXD10P28358 340 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 RGS2P41220 211 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 ARHGEF16Q5VV41 709 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 NOSTRINQ8IVI9 506 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 DNERQ8NFT8 737 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 USP6NLQ92738 828 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 PXMP2Q9NR77 195 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 GABRQQ9UN88 632 aa26.96■■□□□ 1.91
TSPAN4-203ENST00000397397 EIF2AK2P19525 551 aaKnown RBP26.95■■□□□ 1.9
TSPAN4-203ENST00000397397 CYP2B6P20813 491 aa26.95■■□□□ 1.9
TSPAN4-203ENST00000397397 NONOQ15233 471 aaKnown RBP eCLIP26.95■■□□□ 1.94e-6■■■■□ 24.4
TSPAN4-203ENST00000397397 EARS2Q5JPH6 523 aaKnown RBP26.95■■□□□ 1.9
TSPAN4-203ENST00000397397 NSUN6Q8TEA1 469 aaKnown RBP26.95■■□□□ 1.9
TSPAN4-203ENST00000397397 ABHD8Q96I13 439 aa26.95■■□□□ 1.9
TSPAN4-203ENST00000397397 FAM205CA6NFA0 338 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 GNRH1P01148 92 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 ALDH5A1P51649 535 aaPredicted RBP26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 UBXN2AP68543 259 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 PRKCZQ05513 592 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 CTU1Q7Z7A3 348 aaKnown RBP26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 NPLOC4Q8TAT6 608 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 FGD4Q96M96 766 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 DIS3Q9Y2L1 958 aaKnown RBP26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 ASTN1O14525 1302 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 RPTORQ8N122 1335 aa26.94■■□□□ 1.9
TSPAN4-203ENST00000397397 FLT3LGP49771 235 aa26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 NUCB2P80303 420 aa26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 RESTQ13127 1097 aa26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 TBCKQ8TEA7 893 aa26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 SRRDQ9UH36 339 aa26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 CIZ1Q9ULV3 898 aaPredicted RBP26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 FRMPD4Q14CM0 1322 aa26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 MYH7BA7E2Y1 1941 aa26.93■■□□□ 1.9
TSPAN4-203ENST00000397397 BRD1O95696 1058 aa26.92■■□□□ 1.9
TSPAN4-203ENST00000397397 HOXC6P09630 235 aa26.92■■□□□ 1.9
TSPAN4-203ENST00000397397 SREBF1P36956 1147 aa26.92■■□□□ 1.9
TSPAN4-203ENST00000397397 INF2Q27J81 1249 aa26.92■■□□□ 1.9
TSPAN4-203ENST00000397397 APBA2Q99767 749 aa26.92■■□□□ 1.9
TSPAN4-203ENST00000397397 PDCD2LQ9BRP1 358 aa26.92■■□□□ 1.9
TSPAN4-203ENST00000397397 ZDHHC9Q9Y397 364 aa26.92■■□□□ 1.9
TSPAN4-203ENST00000397397 F13A1P00488 732 aa26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 ARHGAP4P98171 946 aa26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 PGM5Q15124 567 aa26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 BRAPQ7Z569 592 aa26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 MAML3Q96JK9 1138 aa26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 IWS1Q96ST2 819 aa26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 MPHOSPH6Q99547 160 aaKnown RBP26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 ZSCAN16Q9H4T2 348 aaPredicted RBP26.91■■□□□ 1.9
TSPAN4-203ENST00000397397 B4DLN1 442 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 MYCLP12524 364 aaPredicted RBP26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 ZNF467Q7Z7K2 595 aaPredicted RBP26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 IL31RAQ8NI17 732 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 TRIM17Q9Y577 477 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 ASB14A6NK59 587 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 NR3C2P08235 984 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 CCND2P30279 289 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 OTOP1Q7RTM1 612 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 CHMP5Q9NZZ3 219 aa26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 NOL7Q9UMY1 257 aaKnown RBP26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 DDX49Q9Y6V7 483 aaKnown RBP26.9■■□□□ 1.9
TSPAN4-203ENST00000397397 LOC102724159A0A0B4J2E5 919 aa26.89■■□□□ 1.89
TSPAN4-203ENST00000397397 PDE4DQ08499 809 aa26.89■■□□□ 1.89
TSPAN4-203ENST00000397397 PWP2Q15269 919 aaKnown RBP26.89■■□□□ 1.89
TSPAN4-203ENST00000397397 PCNX4Q63HM2 1172 aa26.89■■□□□ 1.89
TSPAN4-203ENST00000397397 NEK8Q86SG6 692 aa26.89■■□□□ 1.89
TSPAN4-203ENST00000397397 XRCC5P13010 732 aaKnown RBP26.88■■□□□ 1.89
TSPAN4-203ENST00000397397 ATP2B1P20020 1258 aa26.88■■□□□ 1.89
TSPAN4-203ENST00000397397 PRMT2P55345 433 aa26.88■■□□□ 1.89
TSPAN4-203ENST00000397397 CCL14Q16627 93 aa26.88■■□□□ 1.89
TSPAN4-203ENST00000397397 CRYGNQ8WXF5 182 aa26.88■■□□□ 1.89
TSPAN4-203ENST00000397397 MCM3APO60318 1980 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 CYP3A4P08684 503 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 EDNRBP24530 442 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 ZNF76P36508 570 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 USP11P51784 963 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 IRF5Q13568 498 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 STXBP2Q15833 593 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 LETM2Q2VYF4 491 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 XRRA1Q6P2D8 792 aa26.87■■□□□ 1.89
TSPAN4-203ENST00000397397 ARMCX2Q7L311 632 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms