RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 ZNF446Q9NWS9 450 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 RAD17O75943 681 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 TRIM9Q9C026 710 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 CDC23Q9UJX2 597 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 CTDP1Q9Y5B0 961 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-205ENST00000395757 PCDHB13Q9Y5F0 798 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■□□□□ 9.5
SREBF1-205ENST00000395757 USO1O60763 962 aaKnown RBP16.03■□□□□ 0.16
SREBF1-205ENST00000395757 NEDD1Q8NHV4 660 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 CUL5Q93034 780 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 KIFC2Q96AC6 838 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 MLXIPQ9HAP2 919 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 MYO6Q9UM54 1294 aa16.03■□□□□ 0.16
SREBF1-205ENST00000395757 PARP4Q9UKK3 1724 aaKnown RBP16.02■□□□□ 0.16
SREBF1-205ENST00000395757 PDHBP11177 359 aa16.02■□□□□ 0.16
SREBF1-205ENST00000395757 LONRF2Q1L5Z9 754 aa16.02■□□□□ 0.16
SREBF1-205ENST00000395757 FAM114A1Q8IWE2 563 aa16.02■□□□□ 0.16
SREBF1-205ENST00000395757 NOA1Q8NC60 698 aaKnown RBP16.02■□□□□ 0.16
SREBF1-205ENST00000395757 CRYBG1Q9Y4K1 1723 aa16.02■□□□□ 0.15
SREBF1-205ENST00000395757 MYMKA6NI61 221 aa16.02■□□□□ 0.15
SREBF1-205ENST00000395757 CLIC2O15247 247 aa16.02■□□□□ 0.15
SREBF1-205ENST00000395757 TTLL1O95922 423 aa16.02■□□□□ 0.15
SREBF1-205ENST00000395757 POLR2FP61218 127 aaKnown RBP16.02■□□□□ 0.15
SREBF1-205ENST00000395757 LLGL1Q15334 1064 aa16.02■□□□□ 0.15
SREBF1-205ENST00000395757 CEP112Q8N8E3 955 aa16.02■□□□□ 0.15
SREBF1-205ENST00000395757 IFIH1Q9BYX4 1025 aaKnown RBP16.02■□□□□ 0.15
SREBF1-205ENST00000395757 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 MAGEA1P43355 309 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 RASSF7Q02833 373 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 ICA1Q05084 483 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
SREBF1-205ENST00000395757 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
SREBF1-205ENST00000395757 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 POTEEQ6S8J3 1075 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 ADSSL1Q8N142 457 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 TBC1D22AQ8WUA7 517 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 PANX2Q96RD6 677 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 EHD2Q9NZN4 543 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-205ENST00000395757 CNTNAP4Q9C0A0 1308 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 MOCS3O95396 460 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 DNM2P50570 870 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 TMEM139Q8IV31 216 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 IFT81Q8WYA0 676 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 ANKRD65E5RJM6 399 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 NCK2O43639 380 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 BBOX1O75936 387 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 DDR1Q08345 913 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 C2orf54Q08AI8 447 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 SRGAP1Q7Z6B7 1085 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 TPH2Q8IWU9 490 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 PROCA1Q8NCQ7 364 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-205ENST00000395757 NHEJ1Q9H9Q4 299 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-205ENST00000395757 ABCB6Q9NP58 842 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 MTMR4Q9NYA4 1195 aa16.01■□□□□ 0.15
SREBF1-205ENST00000395757 UTRNP46939 3433 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 ATP1A1P05023 1023 aaKnown RBP16■□□□□ 0.15
SREBF1-205ENST00000395757 EEF2P13639 858 aaKnown RBP16■□□□□ 0.15
SREBF1-205ENST00000395757 CCNE1P24864 410 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 RCAN1P53805 252 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 E2F4Q16254 413 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 PIGOQ8TEQ8 1089 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 RUFY1Q96T51 708 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 MRFAP1Q9Y605 127 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
SREBF1-205ENST00000395757 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
SREBF1-205ENST00000395757 MTA3Q9BTC8 594 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 LSM14BQ9BX40 385 aaKnown RBP16■□□□□ 0.15
SREBF1-205ENST00000395757 TMOD2Q9NZR1 351 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 EIF4A3P38919 411 aaKnown RBP16■□□□□ 0.15
SREBF1-205ENST00000395757 KRT83P78385 493 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 SF3A3Q12874 501 aaKnown RBP eCLIP16■□□□□ 0.154e-7■■■■□ 20.9
SREBF1-205ENST00000395757 FAM26FQ5R3K3 315 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 KCNK18Q7Z418 384 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 GPR161Q8N6U8 529 aaKnown RBP16■□□□□ 0.15
SREBF1-205ENST00000395757 TNFRSF25Q93038 417 aa16■□□□□ 0.15
SREBF1-205ENST00000395757 LGALS16A8MUM7 142 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 GH2P01242 217 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 GTPBP4Q9BZE4 634 aaKnown RBP15.99■□□□□ 0.15
SREBF1-205ENST00000395757 LACRTQ9GZZ8 138 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 L2HGDHQ9H9P8 463 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 PACSIN2Q9UNF0 486 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-205ENST00000395757 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-205ENST00000395757 SAR1BQ9Y6B6 198 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 TBX2Q13207 712 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-205ENST00000395757 TTC19Q6DKK2 380 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-205ENST00000395757 AKAP11Q9UKA4 1901 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 FAM237AA0A1B0GTK4 181 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 HSPA1LP34931 641 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 AOC3Q16853 763 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 CDKAL1Q5VV42 579 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 MYOCDQ8IZQ8 938 aa15.99■□□□□ 0.15
SREBF1-205ENST00000395757 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.99■□□□□ 0.157e-7■■■□□ 17.9
SREBF1-205ENST00000395757 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-205ENST00000395757 NWD2Q9ULI1 1742 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms