RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SKIV2LQ15477 1246 aaKnown RBP24.83■■□□□ 1.57
TRAF4-203ENST00000394925 MCMDC2Q4G0Z9 681 aa24.83■■□□□ 1.57
TRAF4-203ENST00000394925 NFRKBQ6P4R8 1299 aa24.83■■□□□ 1.57
TRAF4-203ENST00000394925 FTOQ9C0B1 505 aaKnown RBP eCLIP24.83■■□□□ 1.57
TRAF4-203ENST00000394925 RAPGEFL1Q9UHV5 662 aa24.83■■□□□ 1.57
TRAF4-203ENST00000394925 A6NJR5 290 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 KPNA6O60684 536 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 IQCF3P0C7M6 154 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 TXNP10599 105 aaKnown RBP24.82■■□□□ 1.56
TRAF4-203ENST00000394925 HSPD1P10809 573 aaKnown RBP24.82■■□□□ 1.56
TRAF4-203ENST00000394925 CHMP4BP1P59074 171 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 DNERQ8NFT8 737 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 NECAB3Q96P71 396 aaPredicted RBP24.82■■□□□ 1.56
TRAF4-203ENST00000394925 SLC9A7Q96T83 725 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 WDR19Q8NEZ3 1342 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 TET1Q8NFU7 2136 aa24.82■■□□□ 1.56
TRAF4-203ENST00000394925 PITPNM1O00562 1244 aa24.81■■□□□ 1.56
TRAF4-203ENST00000394925 PDE1AP54750 535 aa24.81■■□□□ 1.56
TRAF4-203ENST00000394925 USH1GQ495M9 461 aa24.81■■□□□ 1.56
TRAF4-203ENST00000394925 TTC14Q96N46 770 aa24.81■■□□□ 1.56
TRAF4-203ENST00000394925 NOD1Q9Y239 953 aa24.81■■□□□ 1.56
TRAF4-203ENST00000394925 MTCH2Q9Y6C9 303 aa24.81■■□□□ 1.56
TRAF4-203ENST00000394925 TRIP12Q14669 1992 aaPredicted RBP24.81■■□□□ 1.56
TRAF4-203ENST00000394925 B4DLN1 442 aa24.8■■□□□ 1.56
TRAF4-203ENST00000394925 GTPBP6O43824 516 aaPredicted RBP24.8■■□□□ 1.56
TRAF4-203ENST00000394925 BMP1P13497 986 aa24.8■■□□□ 1.56
TRAF4-203ENST00000394925 MRPL12P52815 198 aaKnown RBP24.8■■□□□ 1.56
TRAF4-203ENST00000394925 PTPN11Q06124 597 aaPredicted RBP24.8■■□□□ 1.56
TRAF4-203ENST00000394925 MFSD6Q6ZSS7 791 aa24.8■■□□□ 1.56
TRAF4-203ENST00000394925 ZNF589Q86UQ0 364 aaPredicted RBP24.8■■□□□ 1.56
TRAF4-203ENST00000394925 PHOSPHO2Q8TCD6 241 aa24.8■■□□□ 1.56
TRAF4-203ENST00000394925 TANC1Q9C0D5 1861 aa24.8■■□□□ 1.56
TRAF4-203ENST00000394925 EPOPA6NHQ4 379 aa24.79■■□□□ 1.56
TRAF4-203ENST00000394925 ARIH2O95376 493 aa24.79■■□□□ 1.56
TRAF4-203ENST00000394925 GOLGA8HP0CJ92 632 aa24.79■■□□□ 1.56
TRAF4-203ENST00000394925 SNHG28P0DPA3 235 aa24.79■■□□□ 1.56
TRAF4-203ENST00000394925 BFSP2Q13515 415 aa24.79■■□□□ 1.56
TRAF4-203ENST00000394925 ARHGEF15O94989 841 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 POU3F3P20264 500 aaPredicted RBP24.78■■□□□ 1.56
TRAF4-203ENST00000394925 KCNQ1P51787 676 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 NMIQ13287 307 aaPredicted RBP24.78■■□□□ 1.56
TRAF4-203ENST00000394925 AAK1Q2M2I8 961 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 KRT40Q6A162 431 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 HERC6Q8IVU3 1022 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 ARNTL2Q8WYA1 636 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 UBA5Q9GZZ9 404 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 CPVLQ9H3G5 476 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 ZMYM6O95789 1325 aa24.78■■□□□ 1.56
TRAF4-203ENST00000394925 KIF28PB7ZC32 967 aa24.77■■□□□ 1.56
TRAF4-203ENST00000394925 TAP1Q03518 808 aa24.77■■□□□ 1.56
TRAF4-203ENST00000394925 PTGISQ16647 500 aa24.77■■□□□ 1.56
TRAF4-203ENST00000394925 TBC1D10CQ8IV04 446 aa24.77■■□□□ 1.56
TRAF4-203ENST00000394925 ZKSCAN3Q9BRR0 538 aa24.77■■□□□ 1.56
TRAF4-203ENST00000394925 PCP11498 1178 aaKnown RBP24.76■■□□□ 1.55
TRAF4-203ENST00000394925 GPATCH4Q5T3I0 446 aaKnown RBP24.76■■□□□ 1.55
TRAF4-203ENST00000394925 CCDC62Q6P9F0 684 aa24.76■■□□□ 1.55
TRAF4-203ENST00000394925 RGS22Q8NE09 1264 aa24.76■■□□□ 1.55
TRAF4-203ENST00000394925 AFG1LQ8WV93 481 aa24.76■■□□□ 1.55
TRAF4-203ENST00000394925 TBC1D5Q92609 795 aa24.76■■□□□ 1.55
TRAF4-203ENST00000394925 CCDC171Q6TFL3 1326 aa24.76■■□□□ 1.55
TRAF4-203ENST00000394925 LY6KQ17RY6 165 aa24.75■■□□□ 1.55
TRAF4-203ENST00000394925 SEPT14Q6ZU15 432 aa24.75■■□□□ 1.55
TRAF4-203ENST00000394925 TRIM6-TRIM34B2RNG4 842 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 BAIAP3O94812 1187 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 MMP3P08254 477 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 KCNJ6P48051 423 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 GDF6Q6KF10 455 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-203ENST00000394925 CHST3Q7LGC8 479 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 CCDC155Q8N6L0 562 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 ESR2Q92731 530 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 TAAR1Q96RJ0 339 aa24.74■■□□□ 1.55
TRAF4-203ENST00000394925 RNF41Q9H4P4 317 aaPredicted RBP24.74■■□□□ 1.55
TRAF4-203ENST00000394925 PTPRSQ13332 1948 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 NEDD4P46934 1319 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 TLL1O43897 1013 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 GH1P01241 217 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 CDC37Q16543 378 aaPredicted RBP24.73■■□□□ 1.55
TRAF4-203ENST00000394925 SPRED2Q7Z698 418 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 TICAM2Q86XR7 235 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 CAGE1Q8TC20 777 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 SYTL5Q8TDW5 730 aaPredicted RBP24.73■■□□□ 1.55
TRAF4-203ENST00000394925 AFAP1L1Q8TED9 768 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 RILPL2Q969X0 211 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 CTAGE1Q96RT6 745 aa24.73■■□□□ 1.55
TRAF4-203ENST00000394925 ABCB11O95342 1321 aa24.72■■□□□ 1.55
TRAF4-203ENST00000394925 ARHGAP1Q07960 439 aa24.72■■□□□ 1.55
TRAF4-203ENST00000394925 DGKHQ86XP1 1220 aa24.72■■□□□ 1.55
TRAF4-203ENST00000394925 PNMA1Q8ND90 353 aa24.72■■□□□ 1.55
TRAF4-203ENST00000394925 NSUN6Q8TEA1 469 aaKnown RBP24.72■■□□□ 1.55
TRAF4-203ENST00000394925 COL20A1Q9P218 1284 aa24.72■■□□□ 1.55
TRAF4-203ENST00000394925 COG5Q9UP83 839 aa24.72■■□□□ 1.55
TRAF4-203ENST00000394925 KIAA1217Q5T5P2 1943 aa24.71■■□□□ 1.55
TRAF4-203ENST00000394925 CASTP20810 708 aaKnown RBP24.71■■□□□ 1.55
TRAF4-203ENST00000394925 GRB10Q13322 594 aa24.71■■□□□ 1.55
TRAF4-203ENST00000394925 GPNMBQ14956 572 aa24.71■■□□□ 1.55
TRAF4-203ENST00000394925 TMCO2Q7Z6W1 182 aaPredicted RBP24.71■■□□□ 1.55
TRAF4-203ENST00000394925 SESTD1Q86VW0 696 aa24.71■■□□□ 1.55
TRAF4-203ENST00000394925 ADGRF4Q8IZF3 695 aa24.71■■□□□ 1.55
TRAF4-203ENST00000394925 KAT2BQ92831 832 aa24.71■■□□□ 1.55
TRAF4-203ENST00000394925 CRBNQ96SW2 442 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms