RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PCDHB13Q9Y5F0 798 aa17.83■□□□□ 0.45
PCDH1-203ENST00000394536 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 VWA3BQ502W6 1294 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 TRIM9Q9C026 710 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCDH1-203ENST00000394536 KIAA1024Q9UPX6 916 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 PAK2Q13177 524 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 MAN2A1Q16706 1144 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 NAA35Q5VZE5 725 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 PANK4Q9NVE7 773 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 FAM184BQ9ULE4 1060 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 PCDHA6Q9UN73 950 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 PCDHA8Q9Y5H6 950 aa17.83■□□□□ 0.44
PCDH1-203ENST00000394536 FAM205AQ6ZU69 1335 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 FOXR1Q6PIV2 292 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 GPBP1Q86WP2 473 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 SYCP3Q8IZU3 236 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 ITIH6Q6UXX5 1313 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 KRT13P13646 458 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 PDCLQ13371 301 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 SRLQ86TD4 932 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 LCMT1Q9UIC8 334 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 TCP10Q12799 353 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 ADAM9Q13443 819 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 PDXDC2PQ6P474 469 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 FAM133AQ8N9E0 248 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 DYDC1Q8WWB3 177 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 GJA10Q969M2 543 aa17.82■□□□□ 0.44
PCDH1-203ENST00000394536 SETD1AO15047 1707 aaKnown RBP17.82■□□□□ 0.44
PCDH1-203ENST00000394536 CHMP2AO43633 222 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 GTF2IP78347 998 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 DPP8Q6V1X1 898 aaPredicted RBP17.81■□□□□ 0.44
PCDH1-203ENST00000394536 MS4A14Q96JA4 679 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 AK8Q96MA6 479 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 E7EVH7 732 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 HLA-DOAP06340 250 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 PLCG2P16885 1265 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 E2F4Q16254 413 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 IFI16Q16666 785 aaKnown RBP17.81■□□□□ 0.44
PCDH1-203ENST00000394536 USH1GQ495M9 461 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 CCDC155Q8N6L0 562 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
PCDH1-203ENST00000394536 PPFIA4O75335 1185 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 CAMTA2O94983 1202 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 ABCB4P21439 1286 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 GALNT17Q6IS24 598 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 RDH13Q8NBN7 331 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 SPATA4Q8NEY3 305 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 HNRNPLLQ8WVV9 542 aaKnown RBP17.81■□□□□ 0.44
PCDH1-203ENST00000394536 DDX12PQ92771 950 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
PCDH1-203ENST00000394536 LTN1O94822 1766 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 CPLX4Q7Z7G2 160 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 A0A1W2PQC6 194 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 EZH2Q15910 746 aaKnown RBP17.8■□□□□ 0.44
PCDH1-203ENST00000394536 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 ERMNQ8TAM6 284 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 DDX25Q9UHL0 483 aaKnown RBP17.8■□□□□ 0.44
PCDH1-203ENST00000394536 CAPN7Q9Y6W3 813 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 USP17L5A8MUK1 530 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 TDP2O95551 362 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 SRGNP10124 158 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 CDK8P49336 464 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 FKBP3Q00688 224 aaKnown RBP17.8■□□□□ 0.44
PCDH1-203ENST00000394536 ITPK1Q13572 414 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 CEP57Q86XR8 500 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
PCDH1-203ENST00000394536 MSANTD4Q8NCY6 345 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 OSBPL9Q96SU4 736 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 CUEDC2Q9H467 287 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 BARHL2Q9NY43 387 aa17.8■□□□□ 0.44
PCDH1-203ENST00000394536 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 LAD1O00515 517 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 ORC4O43929 436 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 SSR1P43307 286 aaKnown RBP17.79■□□□□ 0.44
PCDH1-203ENST00000394536 MAEAQ7L5Y9 396 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 PROCA1Q8NCQ7 364 aaPredicted RBP17.79■□□□□ 0.44
PCDH1-203ENST00000394536 DPH5Q9H2P9 285 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 MEIS1O00470 390 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 NTSR2O95665 410 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 KCTD1Q719H9 257 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 PEX26Q7Z412 305 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 CLEC10AQ8IUN9 316 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 SH2D3CQ8N5H7 860 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 CCDC114Q96M63 670 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 ZC3H12CQ9C0D7 883 aaKnown RBP17.79■□□□□ 0.44
PCDH1-203ENST00000394536 PSTPIP2Q9H939 334 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 STIM2Q9P246 746 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 ARHGAP25P42331 645 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 SCNN1DP51172 638 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 NNTQ13423 1086 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 SELENOSQ9BQE4 189 aa17.79■□□□□ 0.44
PCDH1-203ENST00000394536 DMGDHQ9UI17 866 aaKnown RBP17.79■□□□□ 0.44
PCDH1-203ENST00000394536 EPHB4P54760 987 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms