RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 ADGRF4Q8IZF3 695 aa20.13■□□□□ 0.81
HMGN1-204ENST00000380749 MTG1Q9BT17 334 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-204ENST00000380749 NOC4LQ9BVI4 516 aaKnown RBP20.13■□□□□ 0.81
HMGN1-204ENST00000380749 TRPV6Q9H1D0 765 aa20.13■□□□□ 0.81
HMGN1-204ENST00000380749 TET1Q8NFU7 2136 aa20.13■□□□□ 0.81
HMGN1-204ENST00000380749 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
HMGN1-204ENST00000380749 PURAQ00577 322 aaKnown RBP20.12■□□□□ 0.81
HMGN1-204ENST00000380749 TTLL4Q14679 1199 aa20.12■□□□□ 0.81
HMGN1-204ENST00000380749 IFIT1BQ5T764 474 aaKnown RBP20.12■□□□□ 0.81
HMGN1-204ENST00000380749 RASIP1Q5U651 963 aa20.12■□□□□ 0.81
HMGN1-204ENST00000380749 MCF2L2Q86YR7 1114 aa20.12■□□□□ 0.81
HMGN1-204ENST00000380749 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-204ENST00000380749 UMODL1Q5DID0 1318 aa20.12■□□□□ 0.81
HMGN1-204ENST00000380749 SPTBN5Q9NRC6 3674 aaKnown RBP20.12■□□□□ 0.81
HMGN1-204ENST00000380749 TRANK1O15050 2925 aa20.11■□□□□ 0.81
HMGN1-204ENST00000380749 KPNA6O60684 536 aa20.11■□□□□ 0.81
HMGN1-204ENST00000380749 QRICH1Q2TAL8 776 aa20.11■□□□□ 0.81
HMGN1-204ENST00000380749 TTC22Q5TAA0 569 aa20.11■□□□□ 0.81
HMGN1-204ENST00000380749 FBXO11Q86XK2 927 aa20.11■□□□□ 0.81
HMGN1-204ENST00000380749 HERVK_113Q902F9 699 aa20.11■□□□□ 0.81
HMGN1-204ENST00000380749 MRPL11Q9Y3B7 192 aaKnown RBP20.11■□□□□ 0.81
HMGN1-204ENST00000380749 TXNP10599 105 aaKnown RBP20.1■□□□□ 0.81
HMGN1-204ENST00000380749 CCL23P55773 120 aa20.1■□□□□ 0.81
HMGN1-204ENST00000380749 TRDNQ13061 729 aa20.1■□□□□ 0.81
HMGN1-204ENST00000380749 FAM47CQ5HY64 1035 aa20.1■□□□□ 0.81
HMGN1-204ENST00000380749 RUFY2Q8WXA3 655 aa20.1■□□□□ 0.81
HMGN1-204ENST00000380749 WNT8AQ9H1J5 351 aa20.1■□□□□ 0.81
HMGN1-204ENST00000380749 ZNF576Q9H609 170 aa20.1■□□□□ 0.81
HMGN1-204ENST00000380749 FGBP02675 491 aa20.09■□□□□ 0.81
HMGN1-204ENST00000380749 GSPT1P15170 499 aaKnown RBP20.09■□□□□ 0.81
HMGN1-204ENST00000380749 RAB30Q15771 203 aa20.09■□□□□ 0.81
HMGN1-204ENST00000380749 RPUSD2Q8IZ73 545 aaKnown RBP20.09■□□□□ 0.81
HMGN1-204ENST00000380749 SYTL5Q8TDW5 730 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-204ENST00000380749 NSUN6Q8TEA1 469 aaKnown RBP20.09■□□□□ 0.81
HMGN1-204ENST00000380749 PBX4Q9BYU1 374 aa20.09■□□□□ 0.81
HMGN1-204ENST00000380749 IL25Q9H293 177 aa20.09■□□□□ 0.81
HMGN1-204ENST00000380749 TRMT13Q9NUP7 481 aaKnown RBP20.09■□□□□ 0.81
HMGN1-204ENST00000380749 SUPT16HQ9Y5B9 1047 aaKnown RBP20.09■□□□□ 0.81
HMGN1-204ENST00000380749 A6NJR5 290 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 PDE4AP27815 886 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 GRIN2CQ14957 1233 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 NFRKBQ6P4R8 1299 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 COPS5Q92905 334 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 IWS1Q96ST2 819 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 RMDN3Q96TC7 470 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 JMJD4Q9H9V9 463 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 VAT1LQ9HCJ6 419 aa20.08■□□□□ 0.81
HMGN1-204ENST00000380749 GRXCR1A8MXD5 290 aa20.08■□□□□ 0.8
HMGN1-204ENST00000380749 PFKMP08237 780 aa20.08■□□□□ 0.8
HMGN1-204ENST00000380749 STXBP2Q15833 593 aa20.08■□□□□ 0.8
HMGN1-204ENST00000380749 NBPF20Q3BBV1 942 aa20.08■□□□□ 0.8
HMGN1-204ENST00000380749 OTOP2Q7RTS6 562 aa20.08■□□□□ 0.8
HMGN1-204ENST00000380749 AMNQ9BXJ7 453 aa20.08■□□□□ 0.8
HMGN1-204ENST00000380749 CXXC1Q9P0U4 656 aaPredicted RBP20.08■□□□□ 0.8
HMGN1-204ENST00000380749 MSRAQ9UJ68 235 aa20.08■□□□□ 0.8
HMGN1-204ENST00000380749 U3KPZ7 1027 aaPredicted RBP20.08■□□□□ 0.8
HMGN1-204ENST00000380749 KAT6AQ92794 2004 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 ARIH2O95376 493 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 GH1P01241 217 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 CYP2C9P11712 490 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 PBX2P40425 430 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 PTPN11Q06124 597 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-204ENST00000380749 SEC23AQ15436 765 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 ARHGEF16Q5VV41 709 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 SEPT14Q6ZU15 432 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 TBC1D5Q92609 795 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 SCLYQ96I15 445 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 TAAR1Q96RJ0 339 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 GAS2L1Q99501 681 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-204ENST00000380749 COL20A1Q9P218 1284 aa20.07■□□□□ 0.8
HMGN1-204ENST00000380749 DOCK5Q9H7D0 1870 aa20.06■□□□□ 0.8
HMGN1-204ENST00000380749 ERICH2A1L162 156 aa20.06■□□□□ 0.8
HMGN1-204ENST00000380749 KLRF2D3W0D1 207 aa20.06■□□□□ 0.8
HMGN1-204ENST00000380749 CCDC62Q6P9F0 684 aa20.06■□□□□ 0.8
HMGN1-204ENST00000380749 RALYLQ86SE5 291 aaKnown RBP20.06■□□□□ 0.8
HMGN1-204ENST00000380749 NOD1Q9Y239 953 aa20.06■□□□□ 0.8
HMGN1-204ENST00000380749 MUC3AQ02505 3323 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 PTPRSQ13332 1948 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 ZBBXA8MT70 800 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 CFBP00751 764 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 MMP3P08254 477 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 EIF2AK2P19525 551 aaKnown RBP20.05■□□□□ 0.8
HMGN1-204ENST00000380749 SART3Q15020 963 aaKnown RBP20.05■□□□□ 0.8
HMGN1-204ENST00000380749 CYB5R4Q7L1T6 521 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 STAG2Q8N3U4 1231 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 COL25A1Q9BXS0 654 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-204ENST00000380749 PXMP2Q9NR77 195 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 SLC4A7Q9Y6M7 1214 aa20.05■□□□□ 0.8
HMGN1-204ENST00000380749 PITPNM1O00562 1244 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 ZBTB5O15062 677 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 CYP21A2P08686 494 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 CHMLP26374 656 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 RFC2P35250 354 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 TRAF1Q13077 416 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 AFG1LQ8WV93 481 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 MAD2L2Q9UI95 211 aa20.04■□□□□ 0.8
HMGN1-204ENST00000380749 PRRC2BQ5JSZ5 2229 aaKnown RBP20.03■□□□□ 0.8
HMGN1-204ENST00000380749 IFIT3O14879 490 aaKnown RBP20.03■□□□□ 0.8
HMGN1-204ENST00000380749 EIF3JO75822 258 aaKnown RBP20.03■□□□□ 0.8
HMGN1-204ENST00000380749 ACTN1P12814 892 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms