RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 MAGI2Q86UL8 1455 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 HGSO14964 777 aaPredicted RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 SCYL1Q96KG9 808 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 H7C0C1 242 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 ADCY8P40145 1251 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 ATP5OP48047 213 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
LINC00654-201ENST00000379053 ACCSQ96QU6 501 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 LRRC4Q9HBW1 653 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 ARAP3Q8WWN8 1544 aa11.94□□□□□ -0.5
LINC00654-201ENST00000379053 SLC4A1P02730 911 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 CCDC62Q6P9F0 684 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 DSTYKQ6XUX3 929 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 PCDHA4Q9UN74 947 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 KIF24Q5T7B8 1368 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 ZNF233A6NK53 670 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 ARHGAP6O43182 974 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 SASH1O94885 1247 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 BFSP1Q12934 665 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 PAK2Q13177 524 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 GRK7Q8WTQ7 553 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 RAB17Q9H0T7 212 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 DBNLQ9UJU6 430 aaKnown RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 THAP12O43422 761 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 BNIP3LO60238 219 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 RBBP5Q15291 538 aaKnown RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 RUFY4Q6ZNE9 571 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 CEP57Q86XR8 500 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 DYNLL2Q96FJ2 89 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 NXF1Q9UBU9 619 aaKnown RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 S100BP04271 92 aaPredicted RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 GCFC2P16383 781 aaKnown RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 GAP43P17677 238 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 SUSD4Q5VX71 490 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 KAZNQ674X7 775 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 SLC38A10Q9HBR0 1119 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 MYO3BQ8WXR4 1341 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 MYOM2P54296 1465 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 GNAT1P11488 350 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 PHBP35232 272 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 C10orf67Q8IYJ2 551 aa11.93□□□□□ -0.5
LINC00654-201ENST00000379053 TRIM56Q9BRZ2 755 aaKnown RBP11.93□□□□□ -0.5
LINC00654-201ENST00000379053 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 SRGAP2CP0DJJ0 459 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 LMNB1P20700 586 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 CACNB3P54284 484 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 PTPROQ16827 1216 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 CATSPER4Q7RTX7 472 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 RNF139Q8WU17 664 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 LARP4BQ92615 738 aaKnown RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 SYMPKQ92797 1274 aaKnown RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 NLRP4Q96MN2 994 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 HINFPQ9BQA5 517 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 HEXIM1O94992 359 aaKnown RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 EXOC3L4Q17RC7 722 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 TTC31Q49AM3 519 aaPredicted RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 SIX6OS1Q8N1H7 587 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 MCUR1Q96AQ8 359 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 RILPQ96NA2 401 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 BSDC1Q9NW68 430 aaPredicted RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 PRKAB2O43741 272 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 IFT122Q9HBG6 1241 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 MAD1L1Q9Y6D9 718 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 ANKARQ7Z5J8 1434 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 hCG_1984214I3L0E3 225 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 KCNK3O14649 394 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 GH2P01242 217 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 ZNF75DP51815 510 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 ZNF713Q8N859 430 aaPredicted RBP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 PLEKHA4Q9H4M7 779 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 UBN1Q9NPG3 1134 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 TPCN1Q9ULQ1 816 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC00654-201ENST00000379053 ADCY9O60503 1353 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 ABCC4O15439 1325 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 PPARDQ03181 441 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 DENND2CQ68D51 928 aa11.92□□□□□ -0.5
LINC00654-201ENST00000379053 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms