RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 RUFY1Q96T51 708 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 JPH2Q9BR39 696 aaPredicted RBP12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 CXorf56Q9H5V9 222 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 RBM28Q9NW13 759 aaKnown RBP12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 LSP1P33241 339 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 CCDC178Q5BJE1 867 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 MTMR8Q96EF0 704 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
TM9SF2-201ENST00000376387 RNASE9P60153 205 aaKnown RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 NAA35Q5VZE5 725 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 C8orf74Q6P047 294 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 PIGBQ92521 554 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 P2RX5Q93086 422 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 ANAPC4Q9UJX5 808 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 GFPT1Q06210 699 aaPredicted RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 IRF5Q13568 498 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 KCNB1Q14721 858 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 ALS2CLQ60I27 953 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 EMBQ6PCB8 327 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 CAVIN3Q969G5 261 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 RIOK1Q9BRS2 568 aaKnown RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 KBTBD4Q9NVX7 518 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 MEFVO15553 781 aaPredicted RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 HDLBPQ00341 1268 aaKnown RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 RASSF7Q02833 373 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 DTHD1Q6ZMT9 781 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 CCDC155Q8N6L0 562 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 EPB41L5Q9HCM4 733 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 HYOU1Q9Y4L1 999 aa12.74□□□□□ -0.37
TM9SF2-201ENST00000376387 H0YHG0 523 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 IBSPP21815 317 aaPredicted RBP12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 MAP2K2P36507 400 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 GUCY2DQ02846 1103 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 PDE4DQ08499 809 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 KLHDC7AQ5VTJ3 777 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 IQCA1Q86XH1 822 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 IQCKQ8N0W5 287 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 TSGA10Q9BZW7 698 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 LRRC53A6NM62 1247 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 LMNB1P20700 586 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 INF2Q27J81 1249 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 ARL6IP4Q66PJ3 421 aaKnown RBP12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 BLIDQ8IZY5 108 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 ZNF473Q8WTR7 871 aaKnown RBP12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 PYM1Q9BRP8 204 aaKnown RBP12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 SEMA6BQ9H3T3 888 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 COL4A1P02462 1669 aa12.73□□□□□ -0.37
TM9SF2-201ENST00000376387 USP17L12C9JPN9 530 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 USP17L21D6R901 530 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 AKR1B10O60218 316 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CYP2D6P10635 497 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 PLCG1P19174 1290 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CCNE1P24864 410 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 UBA7P41226 1012 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 SLC1A4P43007 532 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 GYG1P46976 350 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 MTA1Q13330 715 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 RNF187Q5TA31 235 aaPredicted RBP12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 RETREG2Q8NC44 543 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 ECEL1O95672 775 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 ITIH3Q06033 890 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 STAG2Q8N3U4 1231 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 DHTKD1Q96HY7 919 aaPredicted RBP12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 ERGIC2Q96RQ1 377 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 EPN3Q9H201 632 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 SIK3Q9Y2K2 1263 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 NUP98P52948 1817 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 KIAA0754O94854 1291 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 FSBPO95073 299 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 PRLRP16471 622 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CDK17Q00537 523 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 MECOMQ03112 1051 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 SPRED3Q2MJR0 410 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 CFAP58Q5T655 872 aa12.72□□□□□ -0.37
TM9SF2-201ENST00000376387 KDM7AQ6ZMT4 941 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms