RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 BRDTQ58F21 947 aaPredicted RBP23.78■■□□□ 1.4
CHPF-202ENST00000373891 KRT40Q6A162 431 aa23.78■■□□□ 1.4
CHPF-202ENST00000373891 FTOQ9C0B1 505 aaKnown RBP eCLIP23.78■■□□□ 1.46e-11■□□□□ 10.3
CHPF-202ENST00000373891 TSPYL2Q9H2G4 693 aaPredicted RBP23.78■■□□□ 1.4
CHPF-202ENST00000373891 RAD50Q92878 1312 aa23.78■■□□□ 1.4
CHPF-202ENST00000373891 BDP1A6H8Y1 2624 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 EPOPA6NHQ4 379 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 ARHGEF15O94989 841 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 ARIH2O95376 493 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 TXNP10599 105 aaKnown RBP23.77■■□□□ 1.4
CHPF-202ENST00000373891 HSPD1P10809 573 aaKnown RBP23.77■■□□□ 1.4
CHPF-202ENST00000373891 ACTN1P12814 892 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 PDE1AP54750 535 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 NMIQ13287 307 aaPredicted RBP23.77■■□□□ 1.4
CHPF-202ENST00000373891 MCMDC2Q4G0Z9 681 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 SCFD2Q8WU76 684 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 ZKSCAN3Q9BRR0 538 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 TCP11L1Q9NUJ3 509 aa23.77■■□□□ 1.4
CHPF-202ENST00000373891 LOC102724159A0A0B4J2E5 919 aa23.76■■□□□ 1.39
CHPF-202ENST00000373891 KCNQ1P51787 676 aa23.76■■□□□ 1.39
CHPF-202ENST00000373891 PWP2Q15269 919 aaKnown RBP23.76■■□□□ 1.39
CHPF-202ENST00000373891 TBC1D10CQ8IV04 446 aa23.76■■□□□ 1.39
CHPF-202ENST00000373891 RETREG2Q8NC44 543 aa23.76■■□□□ 1.39
CHPF-202ENST00000373891 UBA5Q9GZZ9 404 aa23.76■■□□□ 1.39
CHPF-202ENST00000373891 NOD1Q9Y239 953 aa23.76■■□□□ 1.39
CHPF-202ENST00000373891 COL4A4P53420 1690 aaPredicted RBP23.76■■□□□ 1.39
CHPF-202ENST00000373891 NKRFO15226 690 aaKnown RBP eCLIP23.75■■□□□ 1.39
CHPF-202ENST00000373891 IQCF3P0C7M6 154 aa23.75■■□□□ 1.39
CHPF-202ENST00000373891 EDNRBP24530 442 aa23.75■■□□□ 1.39
CHPF-202ENST00000373891 ARNTL2Q8WYA1 636 aa23.75■■□□□ 1.39
CHPF-202ENST00000373891 MPHOSPH6Q99547 160 aaKnown RBP23.75■■□□□ 1.39
CHPF-202ENST00000373891 LAMA4Q16363 1823 aa23.75■■□□□ 1.39
CHPF-202ENST00000373891 XIRP2A4UGR9 3374 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 A6NJR5 290 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 NFRKBQ6P4R8 1299 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 MFSD6Q6ZSS7 791 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 SPRED2Q7Z698 418 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 DNERQ8NFT8 737 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 TBC1D5Q92609 795 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 SLC9A7Q96T83 725 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 MTCH2Q9Y6C9 303 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 WDR19Q8NEZ3 1342 aa23.74■■□□□ 1.39
CHPF-202ENST00000373891 GTPBP6O43824 516 aaPredicted RBP23.73■■□□□ 1.39
CHPF-202ENST00000373891 CHST3Q7LGC8 479 aa23.73■■□□□ 1.39
CHPF-202ENST00000373891 NEDD4P46934 1319 aa23.73■■□□□ 1.39
CHPF-202ENST00000373891 TRIM6-TRIM34B2RNG4 842 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 PITPNM1O00562 1244 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 SNHG28P0DPA3 235 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 BMP1P13497 986 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 RFC2P35250 354 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 TAP1Q03518 808 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 PTGISQ16647 500 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 LY6KQ17RY6 165 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 SEPT14Q6ZU15 432 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 TMCO2Q7Z6W1 182 aaPredicted RBP23.72■■□□□ 1.39
CHPF-202ENST00000373891 HERC6Q8IVU3 1022 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 AFG1LQ8WV93 481 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 RILPL2Q969X0 211 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 CRBNQ96SW2 442 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 CCDC171Q6TFL3 1326 aa23.72■■□□□ 1.39
CHPF-202ENST00000373891 KPNA6O60684 536 aa23.71■■□□□ 1.39
CHPF-202ENST00000373891 BFSP2Q13515 415 aa23.71■■□□□ 1.39
CHPF-202ENST00000373891 CDC37Q16543 378 aaPredicted RBP23.71■■□□□ 1.39
CHPF-202ENST00000373891 TTC14Q96N46 770 aa23.71■■□□□ 1.39
CHPF-202ENST00000373891 TAAR1Q96RJ0 339 aa23.71■■□□□ 1.39
CHPF-202ENST00000373891 PNMA2Q9UL42 364 aa23.71■■□□□ 1.39
CHPF-202ENST00000373891 BRWD1Q9NSI6 2320 aa23.71■■□□□ 1.39
CHPF-202ENST00000373891 ZMYM6O95789 1325 aa23.7■■□□□ 1.38
CHPF-202ENST00000373891 GDF6Q6KF10 455 aaPredicted RBP23.7■■□□□ 1.38
CHPF-202ENST00000373891 COL20A1Q9P218 1284 aa23.7■■□□□ 1.38
CHPF-202ENST00000373891 B4DLN1 442 aa23.69■■□□□ 1.38
CHPF-202ENST00000373891 MMP3P08254 477 aa23.69■■□□□ 1.38
CHPF-202ENST00000373891 MRPL12P52815 198 aaKnown RBP23.69■■□□□ 1.38
CHPF-202ENST00000373891 PTPN11Q06124 597 aaPredicted RBP23.69■■□□□ 1.38
CHPF-202ENST00000373891 CCDC62Q6P9F0 684 aa23.69■■□□□ 1.38
CHPF-202ENST00000373891 CTAGE1Q96RT6 745 aa23.69■■□□□ 1.38
CHPF-202ENST00000373891 LNPKQ9C0E8 428 aa23.69■■□□□ 1.38
CHPF-202ENST00000373891 KIF28PB7ZC32 967 aa23.68■■□□□ 1.38
CHPF-202ENST00000373891 TLL1O43897 1013 aa23.68■■□□□ 1.38
CHPF-202ENST00000373891 KCNJ6P48051 423 aa23.68■■□□□ 1.38
CHPF-202ENST00000373891 RRP1P56182 461 aaKnown RBP23.68■■□□□ 1.38
CHPF-202ENST00000373891 AAK1Q2M2I8 961 aa23.68■■□□□ 1.38
CHPF-202ENST00000373891 GPATCH4Q5T3I0 446 aaKnown RBP23.68■■□□□ 1.38
CHPF-202ENST00000373891 PHOSPHO2Q8TCD6 241 aa23.68■■□□□ 1.38
CHPF-202ENST00000373891 SYTL5Q8TDW5 730 aaPredicted RBP23.68■■□□□ 1.38
CHPF-202ENST00000373891 ESR2Q92731 530 aa23.68■■□□□ 1.38
CHPF-202ENST00000373891 LCHNA4D1U4 455 aa23.67■■□□□ 1.38
CHPF-202ENST00000373891 DHX16O60231 1041 aaKnown RBP23.67■■□□□ 1.38
CHPF-202ENST00000373891 GH1P01241 217 aa23.67■■□□□ 1.38
CHPF-202ENST00000373891 ARHGAP1Q07960 439 aa23.67■■□□□ 1.38
CHPF-202ENST00000373891 GRB10Q13322 594 aa23.67■■□□□ 1.38
CHPF-202ENST00000373891 ADGRF4Q8IZF3 695 aa23.67■■□□□ 1.38
CHPF-202ENST00000373891 PNMA1Q8ND90 353 aa23.67■■□□□ 1.38
CHPF-202ENST00000373891 DHX38Q92620 1227 aaKnown RBP23.67■■□□□ 1.38
CHPF-202ENST00000373891 KAT2BQ92831 832 aa23.67■■□□□ 1.38
CHPF-202ENST00000373891 RNF41Q9H4P4 317 aaPredicted RBP23.67■■□□□ 1.38
CHPF-202ENST00000373891 ABCB11O95342 1321 aa23.66■■□□□ 1.38
CHPF-202ENST00000373891 KDM4AO75164 1064 aa23.66■■□□□ 1.38
CHPF-202ENST00000373891 EIF2AK2P19525 551 aaKnown RBP23.66■■□□□ 1.38
CHPF-202ENST00000373891 WDR5P61964 334 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms