RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ZNF75DP51815 510 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 ATP6V0A1Q93050 837 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 HNRNPCL2B2RXH8 293 aa15.33■□□□□ 0.05
RAPGEF1-202ENST00000372190 HNRNPCL1O60812 293 aaKnown RBP15.33■□□□□ 0.05
RAPGEF1-202ENST00000372190 RPL13P26373 211 aaKnown RBP15.33■□□□□ 0.05
RAPGEF1-202ENST00000372190 MAGEA9P43362 315 aa15.33■□□□□ 0.05
RAPGEF1-202ENST00000372190 MAEAQ7L5Y9 396 aa15.33■□□□□ 0.05
RAPGEF1-202ENST00000372190 PIP4K2CQ8TBX8 421 aa15.33■□□□□ 0.05
RAPGEF1-202ENST00000372190 POLR2MP0CAP2 368 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 BIRC3Q13489 604 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 TSKSQ9UJT2 592 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 KRT8P05787 483 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 SSH3Q8TE77 659 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 ARHGEF1Q92888 912 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 COA1Q9GZY4 146 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 ABCC4O15439 1325 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 A0A1B0GVL5 298 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 SLC4A1P02730 911 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 GLE1Q53GS7 698 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 TLK2Q86UE8 772 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 CACTINQ8WUQ7 758 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 EDC3Q96F86 508 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 UBAP1Q9NZ09 502 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 CPSF1Q10570 1443 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 CHUKO15111 745 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 SART1O43290 800 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 EEF1B2P24534 225 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 ADORA1P30542 326 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 APBA1Q02410 837 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 NCAPD2Q15021 1401 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 FAM133BQ5BKY9 247 aaKnown RBP15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 SLFN13Q68D06 897 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 HACE1Q8IYU2 909 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 KIF2CQ99661 725 aa15.33■□□□□ 0.04
RAPGEF1-202ENST00000372190 KRT7P08729 469 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 CYP26C1Q6V0L0 522 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 PALM2Q8IXS6 379 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 EFHD1Q9BUP0 239 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 IFT88Q13099 833 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 WDR75Q8IWA0 830 aaKnown RBP15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 PACSIN2Q9UNF0 486 aaPredicted RBP15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 ANGPTL3Q9Y5C1 460 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 hCG_2014768A0A024R1R8 64 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 KCNQ2O43526 872 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 WDR44Q5JSH3 913 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 HAUS7Q99871 368 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 PRKAG2Q9UGJ0 569 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 CCPG1Q9ULG6 757 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 TRPC1P48995 793 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 PSMC1P62191 440 aaKnown RBP15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 RASA3Q14644 834 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 CALCRLQ16602 461 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 PDXDC1Q6P996 788 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 DIP2CQ9Y2E4 1556 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 CDC42BPBQ9Y5S2 1711 aa15.32■□□□□ 0.04
RAPGEF1-202ENST00000372190 SGSM2O43147 1006 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 SORBS3O60504 671 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 CTNNA1P35221 906 aaKnown RBP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 ATP8B1O43520 1251 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 MRPL28Q13084 256 aaKnown RBP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 FBXO11Q86XK2 927 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 UBL4BQ8N7F7 174 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 OLFM3Q96PB7 478 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 NCOA5Q9HCD5 579 aaKnown RBP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 BSDC1Q9NW68 430 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 E7EWF7 191 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 METTL13Q8N6R0 699 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 APOA1P02647 267 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 SLC8A3P57103 927 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 TBC1D9BQ66K14 1250 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 JADE1Q6IE81 842 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 CCDC17Q96LX7 622 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 IMPACTQ9P2X3 320 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 CTNND2Q9UQB3 1225 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 SNX14Q9Y5W7 946 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 EAF2Q96CJ1 260 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 GPR101Q96P66 508 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 TRIM8Q9BZR9 551 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 CBX8Q9HC52 389 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 ATP8A2Q9NTI2 1148 aa15.31■□□□□ 0.04
RAPGEF1-202ENST00000372190 GOLGA8QA0A0J9YX86 632 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 GOLGA8OA6NCC3 632 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 SMCO2A6NFE2 343 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 GOLGA8NF8WBI6 632 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 DCAF17Q5H9S7 520 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 EP400NLQ6ZTU2 488 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 MIS12Q9H081 205 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 ZFYVE1Q9HBF4 777 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 ARHGAP10A1A4S6 786 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 USP17L8P0C7I0 530 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 CARSP49589 748 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms