RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 NELFCDQ8IXH7 590 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 EFCAB13Q8IY85 973 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 GIMAP8Q8ND71 665 aaPredicted RBP14.33□□□□□ -0.12
CHD1L-202ENST00000369258 BCAS3Q9H6U6 928 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 ANO9A1A5B4 782 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 SRGNP10124 158 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 SPA17Q15506 151 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 ZNF662Q6ZS27 426 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 P2RX5Q93086 422 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 NUP58Q9BVL2 599 aa14.33□□□□□ -0.12
CHD1L-202ENST00000369258 MYH14Q7Z406 1995 aaKnown RBP14.33□□□□□ -0.12
CHD1L-202ENST00000369258 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 TDP2O95551 362 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 ZBED6P86452 979 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 FAM184BQ9ULE4 1060 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 ITGB4P16144 1822 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 NUTM2BA6NNL0 878 aaPredicted RBP14.32□□□□□ -0.12
CHD1L-202ENST00000369258 NUTM2EB1AL46 878 aaPredicted RBP14.32□□□□□ -0.12
CHD1L-202ENST00000369258 CARSP49589 748 aaKnown RBP14.32□□□□□ -0.12
CHD1L-202ENST00000369258 KIF11P52732 1056 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 SPATA4Q8NEY3 305 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 BCAS4Q8TDM0 211 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 PIGSQ96S52 555 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 CRNKL1Q9BZJ0 848 aaKnown RBP14.32□□□□□ -0.12
CHD1L-202ENST00000369258 KBTBD4Q9NVX7 518 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 PCDHA13Q9Y5I0 950 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 DUOX1Q9NRD9 1551 aa14.32□□□□□ -0.12
CHD1L-202ENST00000369258 FLT1P17948 1338 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 A0A087WUV0 522 aaPredicted RBP14.31□□□□□ -0.12
CHD1L-202ENST00000369258 KLRF2D3W0D1 207 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 SLC37A4O43826 429 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 TAL1P17542 331 aaPredicted RBP14.31□□□□□ -0.12
CHD1L-202ENST00000369258 IRAK1P51617 712 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 TADA2BQ86TJ2 420 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 TBCKQ8TEA7 893 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 NOC3LQ8WTT2 800 aaKnown RBP14.31□□□□□ -0.12
CHD1L-202ENST00000369258 TMEM47Q9BQJ4 181 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 MMTAG2Q9BU76 263 aaKnown RBP14.31□□□□□ -0.12
CHD1L-202ENST00000369258 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 NFU1Q9UMS0 254 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 ZNF804BA4D1E1 1349 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 SMCO2A6NFE2 343 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 MYMKA6NI61 221 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 EBAG9O00559 213 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 GLI1P08151 1106 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 CALML3P27482 149 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 HIBADHP31937 336 aaKnown RBP14.31□□□□□ -0.12
CHD1L-202ENST00000369258 GNGT1P63211 74 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 KCNB1Q14721 858 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 ECM1Q16610 540 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 SLC30A10Q6XR72 485 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 AMOTL1Q8IY63 956 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 KAT2BQ92831 832 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 CACNA1SQ13698 1873 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 DISP2A7MBM2 1401 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 STXBP3O00186 592 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 USO1O60763 962 aaKnown RBP14.31□□□□□ -0.12
CHD1L-202ENST00000369258 TACC1O75410 805 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 VAV2P52735 878 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 NFIXQ14938 502 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 UBE2SQ16763 222 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 TTMPQ5BVD1 217 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 FNBP4Q8N3X1 1017 aaPredicted RBP14.31□□□□□ -0.12
CHD1L-202ENST00000369258 OR2W6PQ8NHA6 318 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 CAPS2Q9BXY5 557 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 TSGA10Q9BZW7 698 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 BCORQ6W2J9 1755 aa14.31□□□□□ -0.12
CHD1L-202ENST00000369258 SHOX2O60902 331 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 GUCY1A3Q02108 690 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 PPFIA1Q13136 1202 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 CCDC181Q5TID7 509 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 MARCH10Q8NA82 808 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 AENQ8WTP8 325 aaKnown RBP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 OSBPL9Q96SU4 736 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 SNX12Q9UMY4 172 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 PAPPAQ13219 1627 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 SEC24CP53992 1094 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 DDX42Q86XP3 938 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 LRRC47Q8N1G4 583 aaKnown RBP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 TRIM58Q8NG06 486 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 DHTKD1Q96HY7 919 aaPredicted RBP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.3□□□□□ -0.12
CHD1L-202ENST00000369258 IKZF4Q9H2S9 585 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
CHD1L-202ENST00000369258 KLHL7Q8IXQ5 586 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 RUFY1Q96T51 708 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 TCP11L1Q9NUJ3 509 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 ANKIB1Q9P2G1 1089 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 SHTN1A0MZ66 631 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 F8W031 263 aaPredicted RBP14.29□□□□□ -0.12
CHD1L-202ENST00000369258 FAM114A1Q8IWE2 563 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 MMGT1Q8N4V1 131 aa14.29□□□□□ -0.12
CHD1L-202ENST00000369258 PURBQ96QR8 312 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms