RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 NOX5Q96PH1 765 aa12.21□□□□□ -0.45
NECTIN4-201ENST00000368012 DPH5Q9H2P9 285 aa12.21□□□□□ -0.45
NECTIN4-201ENST00000368012 RAB21Q9UL25 225 aa12.21□□□□□ -0.45
NECTIN4-201ENST00000368012 CAPN11Q9UMQ6 739 aa12.21□□□□□ -0.45
NECTIN4-201ENST00000368012 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 KCNQ2O43526 872 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 SEC24CP53992 1094 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 SIK1P57059 783 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 PPP2R5BQ15173 497 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 CALCRLQ16602 461 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 UBE2SQ16763 222 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 SLC51AQ86UW1 340 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 OR2W6PQ8NHA6 318 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 SRP68Q9UHB9 627 aaKnown RBP12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 MINPP1Q9UNW1 487 aa12.21□□□□□ -0.46
NECTIN4-201ENST00000368012 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 EPHB6O15197 1021 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 DDAH1O94760 285 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 SYF2O95926 243 aaKnown RBP12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 USP8P40818 1118 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 IRAK1P51617 712 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 CDR1P51861 262 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 TUBB4BP68371 445 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 IFT88Q13099 833 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 TXNRD3Q86VQ6 643 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 FAM133AQ8N9E0 248 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 SH3RF3Q8TEJ3 882 aaPredicted RBP12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 OSBPL9Q96SU4 736 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 NUP58Q9BVL2 599 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 RBM12Q9NTZ6 932 aaKnown RBP12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 CDHR2Q9BYE9 1310 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 RIMBP2O15034 1052 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 CARSP49589 748 aaKnown RBP12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 KLHL30Q0D2K2 578 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 SH3RF1Q7Z6J0 888 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 SETDB2Q96T68 719 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 UBXN6Q9BZV1 441 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 LUC7LQ9NQ29 371 aaKnown RBP12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 TMEM110-MUSTN1A8MSY1 372 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 SEMA3EO15041 775 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 DDX42Q86XP3 938 aaKnown RBP eCLIP12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 SCLT1Q96NL6 688 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 FAM184BQ9ULE4 1060 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 BCS1LQ9Y276 419 aa12.2□□□□□ -0.46
NECTIN4-201ENST00000368012 BAG3O95817 575 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PDE6BP35913 854 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PBX1P40424 430 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 REXO1Q8N1G1 1221 aaKnown RBP12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 SPATA20Q8TB22 786 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 EYA3Q99504 573 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PCDHA6Q9UN73 950 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PCDHA8Q9Y5H6 950 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PALMO75781 387 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 ABCB4P21439 1286 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 GNAQP50148 359 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 SLC9C1Q4G0N8 1177 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PNPLA7Q6ZV29 1317 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 MEIS1O00470 390 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 TDP2O95551 362 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 TRADDQ15628 312 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
NECTIN4-201ENST00000368012 GNA11P29992 359 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 SFMBT2Q5VUG0 894 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 TADA2BQ86TJ2 420 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 IFT20Q8IY31 132 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 ZNF34Q8IZ26 560 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 ZNF512BQ96KM6 892 aaPredicted RBP12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 SNX12Q9UMY4 172 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 TNS3Q68CZ2 1445 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 NPHP3-ACAD11A0A0J9YXS1 232 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 PSMD14O00487 310 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 FGFR1OPO95684 399 aaKnown RBP12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 SRGNP10124 158 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 RBM5P52756 815 aaKnown RBP eCLIP12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 VWA3BQ502W6 1294 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 NSUN4Q96CB9 384 aaKnown RBP12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 CCDC114Q96M63 670 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 TSGA10Q9BZW7 698 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 STIM2Q9P246 746 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
NECTIN4-201ENST00000368012 SNAP25P60880 206 aa12.17□□□□□ -0.46
NECTIN4-201ENST00000368012 PARP10Q53GL7 1025 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms