RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 STAM2O75886 525 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 PDCP20941 246 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 GJB2P29033 226 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 HOXA13P31271 388 aaPredicted RBP15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 SLC9C1Q4G0N8 1177 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 ARHGEF16Q5VV41 709 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 FBXO18Q8NFZ0 1043 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 TRIB2Q92519 343 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 C8orf76Q96K31 380 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 AIFM3Q96NN9 605 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 TAAR1Q96RJ0 339 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 PXMP2Q9NR77 195 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 COL20A1Q9P218 1284 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 RPTORQ8N122 1335 aa15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 RBBP6Q7Z6E9 1792 aaKnown RBP15.84■□□□□ 0.13
NSMCE1-201ENST00000361439 MMP1P03956 469 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 UBXN2AP68543 259 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 SAFBQ15424 915 aaKnown RBP eCLIP15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 CCL14Q16627 93 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 ARMCX2Q7L311 632 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 BLIDQ8IZY5 108 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 ARMC5Q96C12 935 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 SHISA4Q96DD7 197 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 PDCD2LQ9BRP1 358 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 ABHD16BQ9H3Z7 469 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 CNPY2Q9Y2B0 182 aa15.83■□□□□ 0.12
NSMCE1-201ENST00000361439 M0R2N6 131 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 NR3C2P08235 984 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 NPY5RQ15761 445 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 STXBP2Q15833 593 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 KRT40Q6A162 431 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 VSIG10LQ86VR7 867 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 FCHSD1Q86WN1 690 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 MCOLN1Q9GZU1 580 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 FLRT1Q9NZU1 646 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 PCDHA6Q9UN73 950 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 PCDHA8Q9Y5H6 950 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 ASTN1O14525 1302 aa15.82■□□□□ 0.12
NSMCE1-201ENST00000361439 EIF3JO75822 258 aaKnown RBP15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 HSP90AA1P07900 732 aaKnown RBP15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 ELNP15502 786 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 CAPN2P17655 700 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 CCND2P30279 289 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 KRT2P35908 639 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 PDE4DQ08499 809 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 PGM5Q15124 567 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 UBE2SQ16763 222 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 PCNX4Q63HM2 1172 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 KRT25Q7Z3Z0 450 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 ANO3Q9BYT9 981 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 VTA1Q9NP79 307 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 BIN2Q9UBW5 565 aaPredicted RBP15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 KCNJ14Q9UNX9 436 aa15.81■□□□□ 0.12
NSMCE1-201ENST00000361439 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 INHAP05111 366 aa15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 EIF2AK2P19525 551 aaKnown RBP15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 SREBF1P36956 1147 aa15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 CACNB2Q08289 660 aaPredicted RBP15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 LARP1BQ659C4 914 aaKnown RBP15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 PURBQ96QR8 312 aaKnown RBP15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 FOXP1Q9H334 677 aaPredicted RBP15.8■□□□□ 0.12
NSMCE1-201ENST00000361439 HTTP42858 3142 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 MAFGO15525 162 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 CYP3A4P08684 503 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 CYBAP13498 195 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 PRKAR2AP13861 404 aaKnown RBP15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 CYP2C19P33261 490 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 USP11P51784 963 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 ACVR2BQ13705 512 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 JAKMIP3Q5VZ66 844 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 KCNV1Q6PIU1 500 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 CRYGNQ8WXF5 182 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 ZNF333Q96JL9 665 aa15.79■□□□□ 0.12
NSMCE1-201ENST00000361439 LCTP09848 1927 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 CCDC194A0A1B0GVG4 234 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 RBM47A0AV96 593 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 H3BQV1 296 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 MSCO60682 206 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 ZNF865P0CJ78 1059 aaPredicted RBP15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 TGFB3P10600 412 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 ANP32AP39687 249 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 NONOQ15233 471 aaKnown RBP eCLIP15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 GNPTABQ3T906 1256 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 CDHR1Q96JP9 859 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 NAP1L4Q99733 375 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 KATNBL1Q9H079 304 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 HMX1Q9NP08 348 aaPredicted RBP15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 GJB4Q9NTQ9 266 aa15.78■□□□□ 0.12
NSMCE1-201ENST00000361439 BTBD18B2RXH4 712 aa15.77■□□□□ 0.12
NSMCE1-201ENST00000361439 SEPT4O43236 478 aa15.77■□□□□ 0.12
NSMCE1-201ENST00000361439 U2AF2P26368 475 aaKnown RBP eCLIP15.77■□□□□ 0.12
NSMCE1-201ENST00000361439 ARHGAP4P98171 946 aa15.77■□□□□ 0.12
NSMCE1-201ENST00000361439 IQSEC1Q6DN90 963 aa15.77■□□□□ 0.12
NSMCE1-201ENST00000361439 MOXD1Q6UVY6 613 aa15.77■□□□□ 0.12
NSMCE1-201ENST00000361439 NIPA1Q7RTP0 329 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms