RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PTPRSQ13332 1948 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 A6NJR5 290 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 SNHG28P0DPA3 235 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 NMIQ13287 307 aaPredicted RBP24.8■■□□□ 1.56
CD47-202ENST00000361309 TMEM67Q5HYA8 995 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 NFRKBQ6P4R8 1299 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 MFSD6Q6ZSS7 791 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 IL27Q8NEV9 243 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 TTC14Q96N46 770 aa24.8■■□□□ 1.56
CD47-202ENST00000361309 UHRF1Q96T88 793 aaPredicted RBP24.8■■□□□ 1.56
CD47-202ENST00000361309 TSPYL2Q9H2G4 693 aaPredicted RBP24.8■■□□□ 1.56
CD47-202ENST00000361309 MYH7BA7E2Y1 1941 aa24.79■■□□□ 1.56
CD47-202ENST00000361309 KPNA6O60684 536 aa24.79■■□□□ 1.56
CD47-202ENST00000361309 TXNP10599 105 aaKnown RBP24.79■■□□□ 1.56
CD47-202ENST00000361309 ACTN1P12814 892 aa24.79■■□□□ 1.56
CD47-202ENST00000361309 LAMA4Q16363 1823 aa24.78■■□□□ 1.56
CD47-202ENST00000361309 CA3P07451 260 aa24.78■■□□□ 1.56
CD47-202ENST00000361309 IQCF3P0C7M6 154 aa24.78■■□□□ 1.56
CD47-202ENST00000361309 COL9A1P20849 921 aa24.78■■□□□ 1.56
CD47-202ENST00000361309 RFC2P35250 354 aa24.78■■□□□ 1.56
CD47-202ENST00000361309 USH1GQ495M9 461 aa24.78■■□□□ 1.56
CD47-202ENST00000361309 RETREG2Q8NC44 543 aa24.78■■□□□ 1.56
CD47-202ENST00000361309 B4DLN1 442 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 RFXAPO00287 272 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 PITPNM1O00562 1244 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 ARIH2O95376 493 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 GOLGA8HP0CJ92 632 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 MRPL12P52815 198 aaKnown RBP24.77■■□□□ 1.56
CD47-202ENST00000361309 PTPN11Q06124 597 aaPredicted RBP24.77■■□□□ 1.56
CD47-202ENST00000361309 TICAM2Q86XR7 235 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 TBC1D10CQ8IV04 446 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 SLC9A7Q96T83 725 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 CPVLQ9H3G5 476 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 CERS4Q9HA82 394 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 CCDC171Q6TFL3 1326 aa24.77■■□□□ 1.56
CD47-202ENST00000361309 PCP11498 1178 aaKnown RBP24.76■■□□□ 1.55
CD47-202ENST00000361309 CHMP4BP1P59074 171 aa24.76■■□□□ 1.55
CD47-202ENST00000361309 CRBNQ96SW2 442 aa24.76■■□□□ 1.55
CD47-202ENST00000361309 ZKSCAN3Q9BRR0 538 aa24.76■■□□□ 1.55
CD47-202ENST00000361309 FTOQ9C0B1 505 aaKnown RBP eCLIP24.76■■□□□ 1.55
CD47-202ENST00000361309 UBA5Q9GZZ9 404 aa24.76■■□□□ 1.55
CD47-202ENST00000361309 NOD1Q9Y239 953 aa24.76■■□□□ 1.55
CD47-202ENST00000361309 TRIM6-TRIM34B2RNG4 842 aa24.75■■□□□ 1.55
CD47-202ENST00000361309 RRP1P56182 461 aaKnown RBP24.75■■□□□ 1.55
CD47-202ENST00000361309 TFF2Q03403 129 aa24.75■■□□□ 1.55
CD47-202ENST00000361309 BFSP2Q13515 415 aa24.75■■□□□ 1.55
CD47-202ENST00000361309 GPATCH4Q5T3I0 446 aaKnown RBP24.75■■□□□ 1.55
CD47-202ENST00000361309 RGS22Q8NE09 1264 aa24.75■■□□□ 1.55
CD47-202ENST00000361309 PHOSPHO2Q8TCD6 241 aa24.75■■□□□ 1.55
CD47-202ENST00000361309 NEDD4P46934 1319 aa24.75■■□□□ 1.55
CD47-202ENST00000361309 SKIV2LQ15477 1246 aaKnown RBP24.74■■□□□ 1.55
CD47-202ENST00000361309 TBC1D5Q92609 795 aa24.74■■□□□ 1.55
CD47-202ENST00000361309 ESR2Q92731 530 aa24.74■■□□□ 1.55
CD47-202ENST00000361309 RILPL2Q969X0 211 aa24.74■■□□□ 1.55
CD47-202ENST00000361309 RNF41Q9H4P4 317 aaPredicted RBP24.74■■□□□ 1.55
CD47-202ENST00000361309 MTCH2Q9Y6C9 303 aa24.74■■□□□ 1.55
CD47-202ENST00000361309 EPOPA6NHQ4 379 aa24.73■■□□□ 1.55
CD47-202ENST00000361309 BMP1P13497 986 aa24.73■■□□□ 1.55
CD47-202ENST00000361309 POU3F3P20264 500 aaPredicted RBP24.73■■□□□ 1.55
CD47-202ENST00000361309 HDAC1Q13547 482 aaPredicted RBP24.73■■□□□ 1.55
CD47-202ENST00000361309 CCDC62Q6P9F0 684 aa24.73■■□□□ 1.55
CD47-202ENST00000361309 AFG1LQ8WV93 481 aa24.73■■□□□ 1.55
CD47-202ENST00000361309 NECAB3Q96P71 396 aaPredicted RBP24.73■■□□□ 1.55
CD47-202ENST00000361309 GTPBP6O43824 516 aaPredicted RBP24.72■■□□□ 1.55
CD47-202ENST00000361309 ARHGEF15O94989 841 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 CDC37Q16543 378 aaPredicted RBP24.72■■□□□ 1.55
CD47-202ENST00000361309 PTGISQ16647 500 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 LY6KQ17RY6 165 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 SEPT14Q6ZU15 432 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 DGKHQ86XP1 1220 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 HERC6Q8IVU3 1022 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 TAAR1Q96RJ0 339 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 LNPKQ9C0E8 428 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 RAPGEFL1Q9UHV5 662 aa24.72■■□□□ 1.55
CD47-202ENST00000361309 ABCB11O95342 1321 aa24.71■■□□□ 1.55
CD47-202ENST00000361309 MMP3P08254 477 aa24.71■■□□□ 1.55
CD47-202ENST00000361309 TAP1Q03518 808 aa24.71■■□□□ 1.55
CD47-202ENST00000361309 PNMA1Q8ND90 353 aa24.71■■□□□ 1.55
CD47-202ENST00000361309 ARNTL2Q8WYA1 636 aa24.71■■□□□ 1.55
CD47-202ENST00000361309 COL20A1Q9P218 1284 aa24.71■■□□□ 1.55
CD47-202ENST00000361309 COL4A4P53420 1690 aaPredicted RBP24.71■■□□□ 1.55
CD47-202ENST00000361309 KIF28PB7ZC32 967 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 ZNF213O14771 459 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 GH1P01241 217 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 KCNQ1P51787 676 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 MFAP1P55081 439 aaKnown RBP24.7■■□□□ 1.54
CD47-202ENST00000361309 AAK1Q2M2I8 961 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 KRT40Q6A162 431 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 GDF6Q6KF10 455 aaPredicted RBP24.7■■□□□ 1.54
CD47-202ENST00000361309 CHST3Q7LGC8 479 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 ADGRF4Q8IZF3 695 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 CCDC155Q8N6L0 562 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 SYTL5Q8TDW5 730 aaPredicted RBP24.7■■□□□ 1.54
CD47-202ENST00000361309 NSUN6Q8TEA1 469 aaKnown RBP24.7■■□□□ 1.54
CD47-202ENST00000361309 CTAGE1Q96RT6 745 aa24.7■■□□□ 1.54
CD47-202ENST00000361309 BAIAP3O94812 1187 aa24.69■■□□□ 1.54
CD47-202ENST00000361309 SDSP20132 328 aa24.69■■□□□ 1.54
CD47-202ENST00000361309 ARHGAP1Q07960 439 aa24.69■■□□□ 1.54
CD47-202ENST00000361309 IQCA1Q86XH1 822 aa24.69■■□□□ 1.54
CD47-202ENST00000361309 CAGE1Q8TC20 777 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms