RNA–Protein interactions for RNA: ENST00000355951.2

TCAF1-201, Transcript of TRPM8 channel associated factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TCAF1, Length 3,343 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-201ENST00000355951 USP49Q70CQ1 688 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 HOOK3Q86VS8 718 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 RETREG2Q8NC44 543 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 LMCD1Q9NZU5 365 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 DOCK2Q92608 1830 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 GUCY1A2P33402 732 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 GCKP35557 465 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 ZAP70P43403 619 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 PDCD2Q16342 344 aaPredicted RBP10.13□□□□□ -0.79
TCAF1-201ENST00000355951 CNGA4Q8IV77 575 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 SP8Q8IXZ3 490 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 EFCAB13Q8IY85 973 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 XAGE2Q96GT9 111 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 CEP89Q96ST8 783 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 ABHD10Q9NUJ1 306 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 PIM2Q9P1W9 311 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
TCAF1-201ENST00000355951 MYO6Q9UM54 1294 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 REXO2Q9Y3B8 237 aaKnown RBP10.13□□□□□ -0.79
TCAF1-201ENST00000355951 SYNRGQ9UMZ2 1314 aa10.13□□□□□ -0.79
TCAF1-201ENST00000355951 LRRC10BA6NIK2 292 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 BTBD18B2RXH4 712 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PARNO95453 639 aaKnown RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 USP14P54578 494 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PSMC1P62191 440 aaKnown RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 NCAPH2Q6IBW4 605 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 KANK3Q6NY19 840 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PPFIBP1Q86W92 1011 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 MICU3Q86XE3 530 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 FOXP1Q9H334 677 aaPredicted RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 CCDC88AQ3V6T2 1871 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 WDR90Q96KV7 1748 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 AGPSO00116 658 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 CSPG5O95196 566 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 IL4RP24394 825 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 LIG3P49916 1009 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 CCNHP51946 323 aaPredicted RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 TMTC1Q8IUR5 882 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PHACTR1Q9C0D0 580 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 GNL3LQ9NVN8 582 aaKnown RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 MAP3K20Q9NYL2 800 aaKnown RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 ATP6V0A2Q9Y487 856 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PCDHB6Q9Y5E3 794 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 TACC3Q9Y6A5 838 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PSMD14O00487 310 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 ZBTB43O43298 467 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PYGBP11216 843 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 AKAP17AQ02040 695 aaKnown RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 DPYDQ12882 1025 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 TADA2BQ86TJ2 420 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 CTCFLQ8NI51 663 aaPredicted RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 PARD3BQ8TEW8 1205 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 TEKT1Q969V4 418 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 CTAGE1Q96RT6 745 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 LIMA1Q9UHB6 759 aaKnown RBP10.12□□□□□ -0.79
TCAF1-201ENST00000355951 MAPK8IP1Q9UQF2 711 aa10.12□□□□□ -0.79
TCAF1-201ENST00000355951 IFNAR1P17181 557 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 VCAM1P19320 739 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 CASP1P29466 404 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 ADD2P35612 726 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 LIFRP42702 1097 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 GJA8P48165 433 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 SESN3P58005 492 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 PI16Q6UXB8 463 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 STAG2Q8N3U4 1231 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 TTLL6Q8N841 843 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 VGLL2Q8N8G2 317 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 ZBTB10Q96DT7 871 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 CSRNP2Q9H175 543 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
TCAF1-201ENST00000355951 COL4A5P29400 1685 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 MYH6P13533 1939 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 MYH2Q9UKX2 1941 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 TARSL2A2RTX5 802 aaKnown RBP10.11□□□□□ -0.79
TCAF1-201ENST00000355951 TIMM44O43615 452 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 APLP1P51693 650 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 HSP90B2PQ58FF3 399 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 RILPL1Q5EBL4 403 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 SHISA4Q96DD7 197 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 SLC7A5P2Q9GIP4 190 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 GREM2Q9H772 168 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 MAST2Q6P0Q8 1798 aa10.11□□□□□ -0.79
TCAF1-201ENST00000355951 B4E1Z4 1266 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 KRT38O76015 456 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 SNUPNO95149 360 aaKnown RBP10.1□□□□□ -0.79
TCAF1-201ENST00000355951 SMARCA1P28370 1054 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 MATR3P43243 847 aaKnown RBP eCLIP10.1□□□□□ -0.792e-6■■■■■ 27.4
TCAF1-201ENST00000355951 TRIM29Q14134 588 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 FAM117BQ6P1L5 589 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 GBP6Q6ZN66 633 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 DIS3L2Q8IYB7 885 aaKnown RBP10.1□□□□□ -0.79
TCAF1-201ENST00000355951 COG1Q8WTW3 980 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 ACBD3Q9H3P7 528 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 RETREG1Q9H6L5 497 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 INCENPQ9NQS7 918 aa10.1□□□□□ -0.79
TCAF1-201ENST00000355951 AATFQ9NY61 560 aaKnown RBP eCLIP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms