RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CTCFLQ8NI51 663 aaPredicted RBP23.25■■□□□ 1.31
CEACAM3-201ENST00000344550 SPZ1Q9BXG8 430 aa23.25■■□□□ 1.31
CEACAM3-201ENST00000344550 LAMA3Q16787 3333 aa23.25■■□□□ 1.31
CEACAM3-201ENST00000344550 LTBP2Q14767 1821 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 MYH6P13533 1939 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 EIF3JO75822 258 aaKnown RBP23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 RAG1P15918 1043 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 BEX3Q00994 111 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 CHST3Q7LGC8 479 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 SH3RF1Q7Z6J0 888 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 ZNF654Q8IZM8 581 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 BADQ92934 168 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 TBX21Q9UL17 535 aa23.24■■□□□ 1.31
CEACAM3-201ENST00000344550 IRX5P78411 483 aaPredicted RBP23.23■■□□□ 1.31
CEACAM3-201ENST00000344550 CXCL17Q6UXB2 119 aa23.23■■□□□ 1.31
CEACAM3-201ENST00000344550 FAM126BQ8IXS8 530 aa23.23■■□□□ 1.31
CEACAM3-201ENST00000344550 TBC1D5Q92609 795 aa23.23■■□□□ 1.31
CEACAM3-201ENST00000344550 TAAR1Q96RJ0 339 aa23.23■■□□□ 1.31
CEACAM3-201ENST00000344550 SENP2Q9HC62 589 aa23.23■■□□□ 1.31
CEACAM3-201ENST00000344550 DDX49Q9Y6V7 483 aaKnown RBP23.23■■□□□ 1.31
CEACAM3-201ENST00000344550 CCDC69A6NI79 296 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 A6NJR5 290 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 SH2B2O14492 632 aaPredicted RBP23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 OPLAHO14841 1288 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 CYTH3O43739 400 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 PPP1R11O60927 126 aaPredicted RBP23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 CFBP00751 764 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 TIMP1P01033 207 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 ITGA7Q13683 1181 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 KRT32Q14532 448 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 ARHGEF16Q5VV41 709 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 CCDC62Q6P9F0 684 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 SGMS1Q86VZ5 419 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 COL20A1Q9P218 1284 aa23.22■■□□□ 1.31
CEACAM3-201ENST00000344550 CD4P01730 458 aa23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 NEFLP07196 543 aa23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 TXNP10599 105 aaKnown RBP23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 KCNV1Q6PIU1 500 aa23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 OR6J1Q8NGC5 347 aa23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 PIGSQ96S52 555 aa23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 GPHNQ9NQX3 736 aaPredicted RBP23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 PXMP2Q9NR77 195 aa23.21■■□□□ 1.31
CEACAM3-201ENST00000344550 GCOM1H8Y6P7 765 aaPredicted RBP23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 SOX1O00570 391 aaPredicted RBP23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 NR3C2P08235 984 aa23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 HMGB1P09429 215 aaKnown RBP23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 POLR2MP0CAP2 368 aa23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 SLC35G1Q2M3R5 365 aa23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 NFXL1Q6ZNB6 911 aa23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 HOMER1Q86YM7 354 aa23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 RRP36Q96EU6 259 aaKnown RBP23.2■■□□□ 1.3
CEACAM3-201ENST00000344550 PURAQ00577 322 aaKnown RBP23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 FPGSQ05932 587 aa23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 FAM109BQ6ICB4 259 aaPredicted RBP23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 MFSD5Q6N075 450 aa23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 TEX2Q8IWB9 1127 aa23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 EMID1Q96A84 441 aaPredicted RBP23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 NEK1Q96PY6 1258 aa23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 MTG1Q9BT17 334 aaPredicted RBP23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 SLC12A7Q9Y666 1083 aa23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 SZT2Q5T011 3432 aa23.19■■□□□ 1.3
CEACAM3-201ENST00000344550 SUPT20HL2P0C7V6 817 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 TGFB3P10600 412 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 ITGB8P26012 769 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 TMEM63BQ5T3F8 832 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 ERICH6BQ5W0A0 696 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 VSIG10LQ86VR7 867 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 LRCH3Q96II8 777 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 PDCD2LQ9BRP1 358 aa23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 SEC63Q9UGP8 760 aaKnown RBP23.18■■□□□ 1.3
CEACAM3-201ENST00000344550 GRIN2DO15399 1336 aa23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 EPB41L2O43491 1005 aaKnown RBP23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 STAM2O75886 525 aa23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 GH1P01241 217 aa23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 PTPN11Q06124 597 aaPredicted RBP23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 PPIGQ13427 754 aaKnown RBP eCLIP23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 SYNE3Q6ZMZ3 975 aa23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 DHX32Q7L7V1 743 aaKnown RBP23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 TMEM199Q8N511 208 aa23.17■■□□□ 1.3
CEACAM3-201ENST00000344550 EIF2AK2P19525 551 aaKnown RBP23.16■■□□□ 1.3
CEACAM3-201ENST00000344550 RCAN1P53805 252 aa23.16■■□□□ 1.3
CEACAM3-201ENST00000344550 SHHQ15465 462 aa23.16■■□□□ 1.3
CEACAM3-201ENST00000344550 NFRKBQ6P4R8 1299 aa23.16■■□□□ 1.3
CEACAM3-201ENST00000344550 FANCBQ8NB91 859 aa23.16■■□□□ 1.3
CEACAM3-201ENST00000344550 DDX41Q9UJV9 622 aaKnown RBP23.16■■□□□ 1.3
CEACAM3-201ENST00000344550 PIK3CDO00329 1044 aa23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 EXOSC10Q01780 885 aaKnown RBP23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 LAMC2Q13753 1193 aa23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 XRRA1Q6P2D8 792 aa23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 SEPT14Q6ZU15 432 aa23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 SKAP1Q86WV1 359 aa23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 KCNB2Q92953 911 aa23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 BAZ2BQ9UIF8 2168 aaKnown RBP23.15■■□□□ 1.3
CEACAM3-201ENST00000344550 FRMPD4Q14CM0 1322 aa23.14■■□□□ 1.3
CEACAM3-201ENST00000344550 REC8O95072 547 aa23.14■■□□□ 1.29
CEACAM3-201ENST00000344550 ARIH2O95376 493 aa23.14■■□□□ 1.29
CEACAM3-201ENST00000344550 CCND2P30279 289 aa23.14■■□□□ 1.29
CEACAM3-201ENST00000344550 SMAD3P84022 425 aaKnown RBP23.14■■□□□ 1.29
CEACAM3-201ENST00000344550 PGM5Q15124 567 aa23.14■■□□□ 1.29
CEACAM3-201ENST00000344550 ALDH8A1Q9H2A2 487 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms