RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 NKD2Q969F2 451 aaPredicted RBP17.75■□□□□ 0.43
CTHRC1-201ENST00000330295 CD207Q9UJ71 328 aa17.75■□□□□ 0.43
CTHRC1-201ENST00000330295 NLRC5Q86WI3 1866 aa17.75■□□□□ 0.43
CTHRC1-201ENST00000330295 VPS13AQ96RL7 3174 aa17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 NDUFB10O96000 172 aa17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 GNAI3P08754 354 aa17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 HYAL1Q12794 435 aa17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 POLA2Q14181 598 aa17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 CBX2Q14781 532 aaPredicted RBP17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 DGLUCYQ7Z3D6 616 aa17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 CTAGE1Q96RT6 745 aa17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 DBNLQ9UJU6 430 aaKnown RBP17.74■□□□□ 0.43
CTHRC1-201ENST00000330295 PNMA6EA0A0J9YXQ4 647 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 F5H6K3 240 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 KLRC3Q07444 240 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 FBXO11Q86XK2 927 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 TMEM192Q8IY95 271 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 OR6J1Q8NGC5 347 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 WDR11Q9BZH6 1224 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 SMC4Q9NTJ3 1288 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 ACACBO00763 2458 aa17.73■□□□□ 0.43
CTHRC1-201ENST00000330295 BAZ2AQ9UIF9 1905 aaKnown RBP17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 KPNA6O60684 536 aa17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 RBL2Q08999 1139 aa17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 MYOCDQ8IZQ8 938 aa17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 RNF146Q9NTX7 359 aa17.72■□□□□ 0.43
CTHRC1-201ENST00000330295 RALGAPA2Q2PPJ7 1873 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 GREB1LQ9C091 1923 aaPredicted RBP17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 CYP2D7A0A087X1C5 515 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 EYA4O95677 639 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 AMHP03971 560 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 MCTP2Q6DN12 878 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 FRMD5Q7Z6J6 570 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 LCORLQ8N3X6 602 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 MORC4Q8TE76 937 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 RMDN1Q96DB5 314 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 TLR7Q9NYK1 1049 aaKnown RBP17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 FEM1BQ9UK73 627 aa17.71■□□□□ 0.43
CTHRC1-201ENST00000330295 RAD50Q92878 1312 aa17.71■□□□□ 0.42
CTHRC1-201ENST00000330295 ZNF292O60281 2723 aa17.71■□□□□ 0.42
CTHRC1-201ENST00000330295 LCTP09848 1927 aa17.7■□□□□ 0.42
CTHRC1-201ENST00000330295 EP300Q09472 2414 aaPredicted RBP17.7■□□□□ 0.42
CTHRC1-201ENST00000330295 CKBP12277 381 aa17.7■□□□□ 0.42
CTHRC1-201ENST00000330295 C12orf60Q5U649 245 aa17.7■□□□□ 0.42
CTHRC1-201ENST00000330295 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
CTHRC1-201ENST00000330295 NOB1Q9ULX3 412 aaKnown RBP17.7■□□□□ 0.42
CTHRC1-201ENST00000330295 RBAK-RBAKDNI3L0D1 243 aa17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 LINC01565O15544 149 aa17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 PDGFBP01127 241 aaPredicted RBP17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 PDE6AP16499 860 aa17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 CHMP4BP1P59074 171 aa17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 TRMT2AQ8IZ69 625 aaKnown RBP17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 YME1L1Q96TA2 773 aa17.69■□□□□ 0.42
CTHRC1-201ENST00000330295 A6NJR5 290 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 FDX1P10109 184 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 SLC9C2Q5TAH2 1124 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 RIPOR3Q96MK2 946 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 TRERF1Q96PN7 1200 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 LMAN2LQ9H0V9 348 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 IGFLR1Q9H665 355 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 ATP8A2Q9NTI2 1148 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 CYP39A1Q9NYL5 469 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 NYAP2Q9P242 653 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 DMXL1Q9Y485 3027 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 CHD8Q9HCK8 2581 aa17.68■□□□□ 0.42
CTHRC1-201ENST00000330295 RBM47A0AV96 593 aaKnown RBP17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 PRKAB2O43741 272 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 LGR5O75473 907 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 ICAM3P32942 547 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 NDUFV1P49821 464 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 ADAM15Q13444 863 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 TKFCQ3LXA3 575 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 SESTD1Q86VW0 696 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 AMOTL1Q8IY63 956 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 SMRP1Q8NCR6 262 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 ZNF532Q9HCE3 1301 aa17.67■□□□□ 0.42
CTHRC1-201ENST00000330295 MYH4Q9Y623 1939 aa17.66■□□□□ 0.42
CTHRC1-201ENST00000330295 MBTPS1Q14703 1052 aa17.66■□□□□ 0.42
CTHRC1-201ENST00000330295 PTPN21Q16825 1174 aa17.66■□□□□ 0.42
CTHRC1-201ENST00000330295 PURBQ96QR8 312 aaKnown RBP17.66■□□□□ 0.42
CTHRC1-201ENST00000330295 ARMT1Q9H993 441 aa17.66■□□□□ 0.42
CTHRC1-201ENST00000330295 INCENPQ9NQS7 918 aa17.66■□□□□ 0.42
CTHRC1-201ENST00000330295 NKRFO15226 690 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTHRC1-201ENST00000330295 GRM6O15303 877 aa17.65■□□□□ 0.42
CTHRC1-201ENST00000330295 GNAI2P04899 355 aa17.65■□□□□ 0.42
CTHRC1-201ENST00000330295 ALAS1P13196 640 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms