RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 NOGQ13253 232 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 PPP4R3AQ6IN85 833 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 NCAPG2Q86XI2 1143 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 GPRC5AQ8NFJ5 357 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 A1CFQ9NQ94 594 aaKnown RBP11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 CYP39A1Q9NYL5 469 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 PFASO15067 1338 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 GADD45BO75293 160 aaPredicted RBP11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 CYP3A4P08684 503 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 ERCC3P19447 782 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 TM4SF4P48230 202 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 CCNA1P78396 465 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 BAATQ14032 418 aaPredicted RBP11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 DEFB115Q30KQ5 88 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 Q3C1V9 767 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 MROH8Q9H579 483 aa11.65□□□□□ -0.54
VIPAS39-201ENST00000327028 CYP3A7-CYP3A51PA0A087WV96 503 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 LAD1O00515 517 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 TDP2O95551 362 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 CYP3A7P24462 503 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 ME1P48163 572 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 ANKRD13CQ8N6S4 541 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 CAPNS2Q96L46 248 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 MBOAT7Q96N66 472 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 PLXNB2O15031 1838 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 NEMFO60524 1076 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 CIITAP33076 1130 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 PTGDRQ13258 359 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 C4orf32Q8N8J7 132 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 KRI1Q8N9T8 703 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 ZIC5Q96T25 663 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 FBXO2Q9UK22 296 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 PCDHA7Q9UN72 937 aa11.64□□□□□ -0.55
VIPAS39-201ENST00000327028 PTPREP23469 700 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 GRM1Q13255 1194 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 ANKRD35Q8N283 1001 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 DDX25Q9UHL0 483 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 SRPRBQ9Y5M8 271 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 GOLGA6L4A6NEF3 574 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 SLC37A4O43826 429 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 CUTAO60888 179 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 PRPHP41219 470 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 SKOR2Q2VWA4 1001 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 FERMT2Q96AC1 680 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 TAAR1Q96RJ0 339 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 TMEM60Q9H2L4 133 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 PXMP2Q9NR77 195 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 MRVI1Q9Y6F6 885 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 ZNF236Q9UL36 1845 aa11.63□□□□□ -0.55
VIPAS39-201ENST00000327028 A0A1W2PQ27 194 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 A0A1W2PQ64 194 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 MBD3O95983 291 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 BCRP11274 1271 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 Q4G0T1 1027 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 PCNX4Q63HM2 1172 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 ADALQ6DHV7 355 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 POTEDQ86YR6 584 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 RMDN3Q96TC7 470 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 PORCNQ9H237 461 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 ZFYVE28Q9HCC9 887 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 AOC2O75106 756 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 ALDH1A1P00352 501 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 UBXN2AP68543 259 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 CALCRLQ16602 461 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 XRRA1Q6P2D8 792 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 GPT2Q8TD30 523 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 MMP19Q99542 508 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 PDCD2LQ9BRP1 358 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 R3HDMLQ9H3Y0 253 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 LRRC37A2A6NM11 1700 aa11.62□□□□□ -0.55
VIPAS39-201ENST00000327028 FAM86B1E9PN63 330 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 TLR2O60603 784 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 FAM86B2P0C5J1 330 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 EIF2AK2P19525 551 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 ZNF76P36508 570 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 KCTD2Q14681 263 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 PGM5Q15124 567 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 ARHGEF16Q5VV41 709 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 DNERQ8NFT8 737 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 NSUN6Q8TEA1 469 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 MTMR9Q96QG7 549 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 EFCC1Q9HA90 598 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 CPA4Q9UI42 421 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 FCER1AP12319 257 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 C17orf99Q6UX52 265 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 FAM133AQ8N9E0 248 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 LENG9Q96B70 501 aa11.61□□□□□ -0.55
VIPAS39-201ENST00000327028 CLIC6Q96NY7 704 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms