RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CNTD1Q8N815 330 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 IFT22Q9H7X7 185 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 VTA1Q9NP79 307 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 TRHDEQ9UKU6 1024 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 CC2D2AQ9P2K1 1620 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 SHTN1A0MZ66 631 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 CEACAM5P06731 702 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 PYGMP11217 842 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 CEBPAP49715 358 aaPredicted RBP5.42□□□□□ -1.54
SMCO3-201ENST00000316048 DNM2P50570 870 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 TMEM177Q53S58 311 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 E4F1Q66K89 784 aaPredicted RBP5.42□□□□□ -1.54
SMCO3-201ENST00000316048 RSPO2Q6UXX9 243 aaPredicted RBP5.42□□□□□ -1.54
SMCO3-201ENST00000316048 NECAB2Q7Z6G3 386 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 DDX53Q86TM3 631 aaKnown RBP5.42□□□□□ -1.54
SMCO3-201ENST00000316048 LINC00116Q8NCU8 138 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 SMC1BQ8NDV3 1235 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 OR2W6PQ8NHA6 318 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMCO3-201ENST00000316048 DCAF5Q96JK2 942 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 YIPF4Q9BSR8 244 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 SEMA3GQ9NS98 782 aa5.42□□□□□ -1.54
SMCO3-201ENST00000316048 B4E1Z4 1266 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 GABRDO14764 452 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 PRKD3O94806 890 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 F2P00734 622 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 SOD2P04179 222 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 CPEP16870 476 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 PAMP19021 973 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 NOP2P46087 812 aaKnown RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 RAB27AP51159 221 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 SCNN1BP51168 640 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 PCBP3P57721 371 aaKnown RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 IL2P60568 153 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 NFIAQ12857 509 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 KCNAB2Q13303 367 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 HSP90AB2PQ58FF8 381 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 RNF43Q68DV7 783 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 FSTL4Q6MZW2 842 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 ARHGAP27Q6ZUM4 889 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 WDR75Q8IWA0 830 aaKnown RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 CHTF18Q8WVB6 975 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 PTCHD1Q96NR3 888 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 ZFYVE21Q9BQ24 234 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 TRIT1Q9H3H1 467 aaKnown RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 SPTLC3Q9NUV7 552 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 THG1LQ9NWX6 298 aaKnown RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 DUSP13Q9UII6 198 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 CBLCQ9ULV8 474 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 CCDC66A2RUB6 948 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 BRINP1O60477 761 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 SCGB1D2O95969 90 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 LTKP29376 864 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 MECP2P51608 486 aaKnown RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 NEK2P51955 445 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 PAK1Q13153 545 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 NFE2Q16621 373 aaPredicted RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 OVCH1Q7RTY7 1134 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 NLRP10Q86W26 655 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 SHKBP1Q8TBC3 707 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 KCNJ15Q99712 375 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 ALG1Q9BT22 464 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 CELF4Q9BZC1 486 aaKnown RBP5.41□□□□□ -1.54
SMCO3-201ENST00000316048 ATP13A1Q9HD20 1204 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 TPSG1Q9NRR2 321 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 ERVK13-1Q9NX77 482 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 BTG4Q9NY30 223 aa5.41□□□□□ -1.54
SMCO3-201ENST00000316048 CFTRP13569 1480 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 TTBK1Q5TCY1 1321 aaPredicted RBP5.4□□□□□ -1.54
SMCO3-201ENST00000316048 KCNK3O14649 394 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 FKBP9O95302 570 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 ATP2A2P16615 1042 aaKnown RBP5.4□□□□□ -1.54
SMCO3-201ENST00000316048 YBX3P16989 372 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMCO3-201ENST00000316048 ABCB5Q2M3G0 1257 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 CREB3L3Q68CJ9 461 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 FKBP9P1Q75LS8 142 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 TMEM52Q8NDY8 209 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 DPF3Q92784 378 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 ORAI3Q9BRQ5 295 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 EMC7Q9NPA0 242 aa5.4□□□□□ -1.54
SMCO3-201ENST00000316048 C7orf72A4D263 438 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 TSPAN6O43657 245 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 MAP4K4O95819 1239 aaPredicted RBP5.39□□□□□ -1.55
SMCO3-201ENST00000316048 ESR1P03372 595 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 FPR2P25090 351 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 GRK2P25098 689 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 RPL10P27635 214 aaKnown RBP5.39□□□□□ -1.55
SMCO3-201ENST00000316048 GRK3P35626 688 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 BCL6P41182 706 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 EPHB1P54762 984 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 CYP27A1Q02318 531 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 CCDC181Q5TID7 509 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 DUSP27Q5VZP5 1158 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 NAT16Q8N8M0 369 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 CHST14Q8NCH0 376 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 CHAMP1Q96JM3 812 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 MMP19Q99542 508 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 JAM3Q9BX67 310 aa5.39□□□□□ -1.55
SMCO3-201ENST00000316048 ZIM2Q9NZV7 527 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms