RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
SSSCA1-201ENST00000309328 PCDHA4Q9UN74 947 aa20.51■□□□□ 0.87
SSSCA1-201ENST00000309328 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
SSSCA1-201ENST00000309328 SOWAHBA6NEL2 793 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 PDIA4P13667 645 aaKnown RBP20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 PDCP20941 246 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 PDE4DQ08499 809 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 SAFBQ15424 915 aaKnown RBP eCLIP20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 MAP3K21Q5TCX8 1036 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 USP17L6PQ6QN14 398 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 ARMCX2Q7L311 632 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 FCHSD1Q86WN1 690 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 TBC1D5Q92609 795 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 C8orf76Q96K31 380 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 FGD4Q96M96 766 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 PHF20Q9BVI0 1012 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 VTA1Q9NP79 307 aa20.5■□□□□ 0.87
SSSCA1-201ENST00000309328 MSCO60682 206 aa20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 INHAP05111 366 aa20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 HSP90AA1P07900 732 aaKnown RBP20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 ELNP15502 786 aa20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 CLK2P49760 499 aaKnown RBP20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 STXBP2Q15833 593 aa20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 CCL14Q16627 93 aa20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 TAAR1Q96RJ0 339 aa20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 COL20A1Q9P218 1284 aa20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 RBBP6Q7Z6E9 1792 aaKnown RBP20.49■□□□□ 0.87
SSSCA1-201ENST00000309328 ZSWIM8A7E2V4 1837 aa20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 EIF3JO75822 258 aaKnown RBP20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 PRKAR2AP13861 404 aaKnown RBP20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 CCND2P30279 289 aa20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 BLIDQ8IZY5 108 aa20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 PDCD2LQ9BRP1 358 aa20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 HMX1Q9NP08 348 aaPredicted RBP20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 FLRT1Q9NZU1 646 aa20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 RPTORQ8N122 1335 aa20.48■□□□□ 0.87
SSSCA1-201ENST00000309328 NR3C2P08235 984 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 IFFO2Q5TF58 517 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 ZNF333Q96JL9 665 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 AIFM3Q96NN9 605 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 PCDHA6Q9UN73 950 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 PCDHA8Q9Y5H6 950 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 DOCK3Q8IZD9 2030 aa20.47■□□□□ 0.87
SSSCA1-201ENST00000309328 MMP1P03956 469 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 CYBAP13498 195 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 EIF2AK2P19525 551 aaKnown RBP20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 GJB2P29033 226 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 CYP2C19P33261 490 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 KRT2P35908 639 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 SREBF1P36956 1147 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 ACVR2BQ13705 512 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 PGM5Q15124 567 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 UBE2SQ16763 222 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 GNPTABQ3T906 1256 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 KCNV1Q6PIU1 500 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 KRT25Q7Z3Z0 450 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 VSIG10LQ86VR7 867 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 SH3TC2Q8TF17 1288 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 ASTN1O14525 1302 aa20.46■□□□□ 0.87
SSSCA1-201ENST00000309328 SNAI1O95863 264 aaPredicted RBP20.45■□□□□ 0.86
SSSCA1-201ENST00000309328 CACNB2Q08289 660 aaPredicted RBP20.45■□□□□ 0.86
SSSCA1-201ENST00000309328 COL13A1Q5TAT6 717 aaPredicted RBP20.45■□□□□ 0.86
SSSCA1-201ENST00000309328 KRT40Q6A162 431 aa20.45■□□□□ 0.86
SSSCA1-201ENST00000309328 CDHR1Q96JP9 859 aa20.45■□□□□ 0.86
SSSCA1-201ENST00000309328 CCDC194A0A1B0GVG4 234 aa20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 SEPT4O43236 478 aa20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 AKR1A1P14550 325 aa20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 SCFD2Q8WU76 684 aa20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 PURBQ96QR8 312 aaKnown RBP20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 NAP1L4Q99733 375 aaKnown RBP20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 FOXP1Q9H334 677 aaPredicted RBP20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 FAM184BQ9ULE4 1060 aa20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 KCNJ14Q9UNX9 436 aa20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 SMCHD1A6NHR9 2005 aa20.44■□□□□ 0.86
SSSCA1-201ENST00000309328 H3BQV1 296 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 M0R2N6 131 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 MAFGO15525 162 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 TGFB3P10600 412 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 USP11P51784 963 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 NPY5RQ15761 445 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 JAKMIP3Q5VZ66 844 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 IQSEC1Q6DN90 963 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 SHISA4Q96DD7 197 aa20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 ZHX1Q9UKY1 873 aaPredicted RBP20.43■□□□□ 0.86
SSSCA1-201ENST00000309328 NKRFO15226 690 aaKnown RBP eCLIP20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 CYP3A4P08684 503 aa20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 ZNF865P0CJ78 1059 aaPredicted RBP20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 ARHGAP4P98171 946 aa20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 NONOQ15233 471 aaKnown RBP eCLIP20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 LARP1BQ659C4 914 aaKnown RBP20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 NLRX1Q86UT6 975 aa20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 DIS3L2Q8IYB7 885 aaKnown RBP20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 TMEM106CQ9BVX2 250 aa20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 KATNBL1Q9H079 304 aa20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 PAK6Q9NQU5 681 aaPredicted RBP20.42■□□□□ 0.86
SSSCA1-201ENST00000309328 ZNFX1Q9P2E3 1918 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms