RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 HAUS7Q99871 368 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 GLI2P10070 1586 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 SPTLC2O15270 562 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 TMEM154Q6P9G4 183 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 RTKN2Q8IZC4 609 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 IWS1Q96ST2 819 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 MRGBPQ9NV56 204 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 UNC13BO14795 1591 aa16.69■□□□□ 0.26
LEMD3-201ENST00000308330 MAP3K7O43318 606 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 ASIC1P78348 528 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 NNTQ13423 1086 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 USH1GQ495M9 461 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 CERKLQ49MI3 558 aaPredicted RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 EXOC8Q8IYI6 725 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 PPP1R14BQ96C90 147 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 MPP4Q96JB8 637 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 TMA7Q9Y2S6 64 aaKnown RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 SAR1BQ9Y6B6 198 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 PTCH1Q13635 1447 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 CFBP00751 764 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 MYCLP12524 364 aaPredicted RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 TDRD12Q587J7 1177 aaKnown RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 DTHD1Q6ZMT9 781 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 DYDC2Q96IM9 177 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 ATP2A2P16615 1042 aaKnown RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 R3HDM1Q15032 1099 aaKnown RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 BRDTQ58F21 947 aaPredicted RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 GJC2Q5T442 439 aaPredicted RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 SIX5Q8N196 739 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 ZKSCAN4Q969J2 545 aaPredicted RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 KIFC2Q96AC6 838 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 DHX58Q96C10 678 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 Q9H521 79 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 SPATA31A1Q5TZJ5 1347 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 PHEXP78562 749 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 CYLC2Q14093 348 aaPredicted RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
LEMD3-201ENST00000308330 SNX14Q9Y5W7 946 aa16.68■□□□□ 0.26
LEMD3-201ENST00000308330 CFAP73A6NFT4 308 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 DKC1O60832 514 aaKnown RBP eCLIP16.67■□□□□ 0.26
LEMD3-201ENST00000308330 DEXIO95424 95 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 MLH1P40692 756 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 PSMD6Q15008 389 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 CIAPIN1Q6FI81 312 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 STAMBPL1Q96FJ0 436 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 NOD1Q9Y239 953 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 CEP152O94986 1710 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 DIP2BQ9P265 1576 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 A0A0D9SFI3 127 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 SUN1O94901 812 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 MAGEA8P43361 318 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 GSCP56915 257 aaPredicted RBP16.67■□□□□ 0.26
LEMD3-201ENST00000308330 RRAGBQ5VZM2 374 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 CYB5D1Q6P9G0 228 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 TMEM110Q86TL2 294 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 GPHNQ9NQX3 736 aaPredicted RBP16.67■□□□□ 0.26
LEMD3-201ENST00000308330 KRT38O76015 456 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 BAG2O95816 211 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 H2AFXP16104 143 aaPredicted RBP16.67■□□□□ 0.26
LEMD3-201ENST00000308330 NR1D1P20393 614 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 SNX1Q13596 522 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 CHURC1Q8WUH1 139 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 IQCDQ96DY2 449 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 SELENOOQ9BVL4 669 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 EPC1Q9H2F5 836 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 KCNF1Q9H3M0 494 aa16.67■□□□□ 0.26
LEMD3-201ENST00000308330 hCG_1642624A0A1W2PR95 340 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 MCF2LO15068 1137 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 KDM1AO60341 852 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 MTMR3Q13615 1198 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 VPS36Q86VN1 386 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 TRIM47Q96LD4 638 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 DSCC1Q9BVC3 393 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 AS3MTQ9HBK9 375 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 COL15A1P39059 1388 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 SEMA3EO15041 775 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 IRX4P78413 519 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 PTPN12Q05209 780 aaKnown RBP16.66■□□□□ 0.26
LEMD3-201ENST00000308330 IQCB1Q15051 598 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 TMCO4Q5TGY1 634 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 CROCCP2Q86T23 111 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 RABL2BQ9UNT1 228 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 ZNF148Q9UQR1 794 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 SOS2Q07890 1332 aaPredicted RBP16.66■□□□□ 0.26
LEMD3-201ENST00000308330 CHMP2AO43633 222 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 PLCB4Q15147 1175 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 PLIN2Q99541 437 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 CCDC77Q9BR77 488 aa16.66■□□□□ 0.26
LEMD3-201ENST00000308330 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.66■□□□□ 0.26
LEMD3-201ENST00000308330 FBXO9Q9UK97 447 aaPredicted RBP16.66■□□□□ 0.26
LEMD3-201ENST00000308330 H7C1W4 665 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms