RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 PPP1R13LQ8WUF5 828 aa22.89■■□□□ 1.25
PTBP3-201ENST00000210227 COL4A4P53420 1690 aaPredicted RBP22.89■■□□□ 1.25
PTBP3-201ENST00000210227 NMIQ13287 307 aaPredicted RBP22.88■■□□□ 1.25
PTBP3-201ENST00000210227 NFRKBQ6P4R8 1299 aa22.88■■□□□ 1.25
PTBP3-201ENST00000210227 TBC1D10CQ8IV04 446 aa22.88■■□□□ 1.25
PTBP3-201ENST00000210227 MICALL1Q8N3F8 863 aa22.88■■□□□ 1.25
PTBP3-201ENST00000210227 COPS5Q92905 334 aa22.88■■□□□ 1.25
PTBP3-201ENST00000210227 CCDC171Q6TFL3 1326 aa22.87■■□□□ 1.25
PTBP3-201ENST00000210227 A6NJR5 290 aa22.87■■□□□ 1.25
PTBP3-201ENST00000210227 PITPNM1O00562 1244 aa22.87■■□□□ 1.25
PTBP3-201ENST00000210227 RFC2P35250 354 aa22.87■■□□□ 1.25
PTBP3-201ENST00000210227 IL27Q8NEV9 243 aa22.87■■□□□ 1.25
PTBP3-201ENST00000210227 TTC14Q96N46 770 aa22.87■■□□□ 1.25
PTBP3-201ENST00000210227 UHRF1Q96T88 793 aaPredicted RBP22.87■■□□□ 1.25
PTBP3-201ENST00000210227 KPNA6O60684 536 aa22.86■■□□□ 1.25
PTBP3-201ENST00000210227 CA3P07451 260 aa22.86■■□□□ 1.25
PTBP3-201ENST00000210227 PCP11498 1178 aaKnown RBP22.86■■□□□ 1.25
PTBP3-201ENST00000210227 ACTN1P12814 892 aa22.86■■□□□ 1.25
PTBP3-201ENST00000210227 USH1GQ495M9 461 aa22.86■■□□□ 1.25
PTBP3-201ENST00000210227 TMEM67Q5HYA8 995 aa22.86■■□□□ 1.25
PTBP3-201ENST00000210227 MFSD6Q6ZSS7 791 aa22.86■■□□□ 1.25
PTBP3-201ENST00000210227 TICAM2Q86XR7 235 aa22.86■■□□□ 1.25
PTBP3-201ENST00000210227 NEDD4P46934 1319 aa22.85■■□□□ 1.25
PTBP3-201ENST00000210227 TXNP10599 105 aaKnown RBP22.85■■□□□ 1.25
PTBP3-201ENST00000210227 RRP1P56182 461 aaKnown RBP22.85■■□□□ 1.25
PTBP3-201ENST00000210227 SLC9A7Q96T83 725 aa22.85■■□□□ 1.25
PTBP3-201ENST00000210227 TSPYL2Q9H2G4 693 aaPredicted RBP22.85■■□□□ 1.25
PTBP3-201ENST00000210227 B4DLN1 442 aa22.84■■□□□ 1.25
PTBP3-201ENST00000210227 ARIH2O95376 493 aa22.84■■□□□ 1.25
PTBP3-201ENST00000210227 GOLGA8HP0CJ92 632 aa22.84■■□□□ 1.25
PTBP3-201ENST00000210227 MRPL12P52815 198 aaKnown RBP22.84■■□□□ 1.25
PTBP3-201ENST00000210227 PTPN11Q06124 597 aaPredicted RBP22.84■■□□□ 1.25
PTBP3-201ENST00000210227 GPATCH4Q5T3I0 446 aaKnown RBP22.84■■□□□ 1.25
PTBP3-201ENST00000210227 IQCF3P0C7M6 154 aa22.83■■□□□ 1.25
PTBP3-201ENST00000210227 COL9A1P20849 921 aa22.83■■□□□ 1.25
PTBP3-201ENST00000210227 BFSP2Q13515 415 aa22.83■■□□□ 1.25
PTBP3-201ENST00000210227 RETREG2Q8NC44 543 aa22.83■■□□□ 1.25
PTBP3-201ENST00000210227 ZKSCAN3Q9BRR0 538 aa22.83■■□□□ 1.25
PTBP3-201ENST00000210227 CPVLQ9H3G5 476 aa22.83■■□□□ 1.25
PTBP3-201ENST00000210227 RNF41Q9H4P4 317 aaPredicted RBP22.83■■□□□ 1.25
PTBP3-201ENST00000210227 NOD1Q9Y239 953 aa22.83■■□□□ 1.25
PTBP3-201ENST00000210227 RFXAPO00287 272 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 CHMP4BP1P59074 171 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 HDAC1Q13547 482 aaPredicted RBP22.82■■□□□ 1.24
PTBP3-201ENST00000210227 RGS22Q8NE09 1264 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 PHOSPHO2Q8TCD6 241 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 ESR2Q92731 530 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 CRBNQ96SW2 442 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 FTOQ9C0B1 505 aaKnown RBP eCLIP22.82■■□□□ 1.24
PTBP3-201ENST00000210227 CERS4Q9HA82 394 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 MYH7BA7E2Y1 1941 aa22.82■■□□□ 1.24
PTBP3-201ENST00000210227 EPOPA6NHQ4 379 aa22.81■■□□□ 1.24
PTBP3-201ENST00000210227 TRIM6-TRIM34B2RNG4 842 aa22.81■■□□□ 1.24
PTBP3-201ENST00000210227 TFF2Q03403 129 aa22.81■■□□□ 1.24
PTBP3-201ENST00000210227 CDC37Q16543 378 aaPredicted RBP22.81■■□□□ 1.24
PTBP3-201ENST00000210227 CCDC62Q6P9F0 684 aa22.81■■□□□ 1.24
PTBP3-201ENST00000210227 HERC6Q8IVU3 1022 aa22.81■■□□□ 1.24
PTBP3-201ENST00000210227 UBA5Q9GZZ9 404 aa22.81■■□□□ 1.24
PTBP3-201ENST00000210227 MTCH2Q9Y6C9 303 aa22.81■■□□□ 1.24
PTBP3-201ENST00000210227 GTPBP6O43824 516 aaPredicted RBP22.8■■□□□ 1.24
PTBP3-201ENST00000210227 ARHGEF15O94989 841 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 MMP3P08254 477 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 POU3F3P20264 500 aaPredicted RBP22.8■■□□□ 1.24
PTBP3-201ENST00000210227 MFAP1P55081 439 aaKnown RBP22.8■■□□□ 1.24
PTBP3-201ENST00000210227 TAP1Q03518 808 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 SKIV2LQ15477 1246 aaKnown RBP22.8■■□□□ 1.24
PTBP3-201ENST00000210227 PTGISQ16647 500 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 DGKHQ86XP1 1220 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 CCDC155Q8N6L0 562 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 PNMA1Q8ND90 353 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 AFG1LQ8WV93 481 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 NECAB3Q96P71 396 aaPredicted RBP22.8■■□□□ 1.24
PTBP3-201ENST00000210227 ABCB11O95342 1321 aa22.8■■□□□ 1.24
PTBP3-201ENST00000210227 BRWD1Q9NSI6 2320 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 BAIAP3O94812 1187 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 ARHGAP1Q07960 439 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 AAK1Q2M2I8 961 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 RILPL2Q969X0 211 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 CTAGE1Q96RT6 745 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 LNPKQ9C0E8 428 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 MAF1Q9H063 256 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 COL20A1Q9P218 1284 aa22.79■■□□□ 1.24
PTBP3-201ENST00000210227 GH1P01241 217 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 BMP1P13497 986 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 KCNQ1P51787 676 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 LY6KQ17RY6 165 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 SEPT14Q6ZU15 432 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 CAGE1Q8TC20 777 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 SYTL5Q8TDW5 730 aaPredicted RBP22.78■■□□□ 1.24
PTBP3-201ENST00000210227 NSUN6Q8TEA1 469 aaKnown RBP22.78■■□□□ 1.24
PTBP3-201ENST00000210227 AFAP1L1Q8TED9 768 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 ARNTL2Q8WYA1 636 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 TBC1D5Q92609 795 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 TAAR1Q96RJ0 339 aa22.78■■□□□ 1.24
PTBP3-201ENST00000210227 ZNF213O14771 459 aa22.77■■□□□ 1.24
PTBP3-201ENST00000210227 KDM4AO75164 1064 aa22.77■■□□□ 1.24
PTBP3-201ENST00000210227 KRT40Q6A162 431 aa22.77■■□□□ 1.24
PTBP3-201ENST00000210227 GDF6Q6KF10 455 aaPredicted RBP22.77■■□□□ 1.24
PTBP3-201ENST00000210227 SESTD1Q86VW0 696 aa22.77■■□□□ 1.24
PTBP3-201ENST00000210227 IQCA1Q86XH1 822 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms