RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Dis3Q9CSH3 958 aaKnown RBP16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Xrn2Q9DBR1 951 aaKnown RBP16.09■□□□□ 0.17
Ccdc171-204ENSMUST00000126429 Pgap3A2A559 320 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Itgb5O70309 798 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Pik3r1P26450 724 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 PtpreP49446 699 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Kcna2P63141 499 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 PomkQ3TUA9 349 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Xxylt1Q3U4G3 392 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Usp6nlQ80XC3 819 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Atg4cQ811C2 458 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Cyp26b1Q811W2 512 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Rusc1Q8BG26 893 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ttc7aQ8BGB2 858 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Mknk2Q8CDB0 459 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Nup88Q8CEC0 753 aaKnown RBP16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Nat10Q8K224 1024 aaKnown RBP16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Plcd1Q8R3B1 756 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Wasf1Q8R5H6 559 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 SdsQ8VBT2 327 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Kdm4cQ8VCD7 1054 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Fgd4Q91ZT5 766 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Rassf3Q99P51 232 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Npm3Q9CPP0 175 aaKnown RBP16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Snx29Q9D3S3 818 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Q9DAQ4 598 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Hip1rQ9JKY5 1068 aa16.08■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Gna11P21278 359 aa16.07■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Sept4P28661 478 aa16.07■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Tnni3kQ5GIG6 834 aa16.07■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Igf2bp2Q5SF07 592 aaKnown RBP16.07■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Zswim3Q8CFL8 695 aa16.07■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ces1Q8VCC2 565 aa16.07■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Sptbn5F6UCX4 1208 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 NcanP55066 1268 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Kmt5bQ3U8K7 883 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Lrrc14bQ3UJB3 510 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 A1cfQ5YD48 595 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Grik5Q61626 979 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ddx19aQ61655 478 aaKnown RBP16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ankrd54Q91WK7 299 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Capn10Q9ESK3 666 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Msgn1Q9JK54 188 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Sbf2E9PXF8 1872 aa16.06■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Pitpnm1O35954 1243 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 FosP01101 380 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Dnm1P39053 867 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Btbd1P58544 488 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Taf1bP97358 586 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Gjb4Q02738 266 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Col19a1Q0VF58 1136 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Cracr2bQ80ZJ8 394 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Gripap1Q8VD04 806 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Kctd10Q922M3 315 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Mrpl44Q9CY73 333 aaKnown RBP16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Nr2e3Q9QXZ7 395 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ggps1Q9WTN0 300 aa16.05■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Gm7356A0A087WSA6 508 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 E030030I06RikJ3QML9 246 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 MycP01108 439 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Rbp3P49194 1234 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Fam189a2Q4FZH1 290 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ptpn18Q61152 453 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Slc9a1Q61165 820 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Cyp2c29Q64458 490 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Zfp943Q6NZP4 507 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Acnat2Q8BGG9 420 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 LRWD1Q8BUI3 648 aaKnown RBP16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 GneQ91WG8 722 aaKnown RBP16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Bicd2Q921C5 820 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Vwa5aQ99KC8 793 aaKnown RBP16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ddx50Q99MJ9 734 aaKnown RBP16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Maged1Q9QYH6 775 aaKnown RBP16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Plod3Q9R0E1 741 aa16.04■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Cops5O35864 334 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Rfx1P48377 963 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Atp6v1dP57746 247 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Mybpc2Q5XKE0 1136 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Cyp4x1Q6A152 507 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Kbtbd4Q8R179 534 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Pcdhgc5Q91XW9 944 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Smc3Q9CW03 1217 aaKnown RBP16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Kdm8Q9CXT6 414 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Sbno2Q7TNB8 1349 aa16.03■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Btnl4A2CG29 586 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Gm4758L7N258 96 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 SfnO70456 248 aaKnown RBP16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Syt2P46097 422 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 KhsrpQ3U0V1 748 aaKnown RBP16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Madcam1Q61826 405 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Phtf2Q8CB19 747 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Tmem60Q8K174 133 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Vmn1r203Q8R273 311 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Smc1bQ920F6 1248 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Bloc1s2Q9CWG9 143 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Cep72Q9D3R3 646 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 PolkQ9QUG2 852 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Ttc6G3UYY4 1857 aa16.02■□□□□ 0.16
Ccdc171-204ENSMUST00000126429 Zfp804bA0A0G2JGH6 1343 aa16.02■□□□□ 0.15
Ccdc171-204ENSMUST00000126429 Cspp1B2RX88 1205 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms