RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Dis3Q9CSH3 958 aaKnown RBP34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Slc34a2Q9DBP0 697 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Mtmr9Q9Z2D0 545 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Gm13128L7MU96 475 aa34.57■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Cdc14aQ6GQT0 603 aa34.57■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Srek1Q8BZX4 494 aaKnown RBP34.57■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ago4Q8CJF8 861 aa34.57■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Nek9Q8K1R7 984 aa34.57■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Socs7Q8VHQ2 579 aa34.57■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Phldb3E9QAF4 648 aa34.56■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Wnt7aP24383 349 aa34.56■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Cdc25aP48964 514 aa34.56■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Appl2Q8K3G9 662 aa34.56■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Pidd1Q9ERV7 915 aa34.56■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ccnt1Q9QWV9 724 aaKnown RBP34.56■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Plod3Q9R0E1 741 aa34.56■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Gm9857F7CXR1 130 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 WasP70315 520 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Taf1bP97358 586 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Rasip1Q3U0S6 961 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 DpydQ8CHR6 1025 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ppp2r5dQ91V89 594 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Cyp2c39P56656 490 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Znf652Q5DU09 608 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Meis1Q60954 390 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Cln3Q61124 438 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Mcph1Q7TT79 822 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 PdgfcQ8CI19 345 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Vwa5aQ99KC8 793 aaKnown RBP34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Tfr2Q9JKX3 798 aa34.55■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ktn1Q61595 1327 aaKnown RBP34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Erbb2P70424 1256 aa34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Sox10Q04888 466 aa34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Gm28047Q3US59 414 aa34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ece1Q4PZA2 769 aa34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Nup88Q8CEC0 753 aaKnown RBP34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Krt34Q9D646 392 aa34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 GdaQ9R111 454 aa34.54■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Fdxacb1Q3UY23 622 aa34.53■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ccdc189Q6NZQ0 333 aa34.53■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 NfrkbQ6PIJ4 1296 aaKnown RBP34.53■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Nipa1Q8BHK1 323 aa34.53■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Snx17Q8BVL3 470 aa34.53■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Pabpc6Q9D4E6 643 aaKnown RBP34.53■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Extl2Q9ES89 330 aa34.53■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Gjb1P28230 283 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Cntnap5bQ0V8T8 1292 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 4933427I04RikQ3V053 235 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 A1cfQ5YD48 595 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 ShbQ6PD21 503 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 P2ry10Q8BFU7 328 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Plekha4Q8VC98 588 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Tbc1d2B1AVH7 922 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Lrrc32G3XA59 663 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Stra6O70491 670 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ddx4Q61496 702 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Larp6Q8BN59 492 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Nod2Q8K3Z0 1020 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Ggps1Q9WTN0 300 aa34.52■■■■□ 3.12
Ctdnep1-201ENSMUST00000108593 Nfx1B1AY10 1114 aaKnown RBP34.51■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Tmem132dQ76HP3 1097 aa34.51■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Trim29Q8R2Q0 587 aa34.51■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Ccdc88cQ6VGS5 2009 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Ms4a4aA0A087WRT7 236 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Gm43738A0A0G2JEA5 862 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Map7d1A2AJI0 846 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Gm10436L7N1Y3 520 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Mpp3O88910 568 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Pcif1P59114 706 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Itgbl1Q8VDV0 494 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 SetQ9EQU5 289 aaKnown RBP34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Kcnh7Q9ER47 1195 aa34.5■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Prom1O54990 867 aa34.49■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Ppm1jQ149T7 507 aa34.49■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Gpd2Q64521 727 aa34.49■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Hic1Q9R1Y5 733 aa34.49■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Sbno2Q7TNB8 1349 aa34.49■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Rsbn1lD3Z0K6 821 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 ArP19091 899 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Cyp2c37P56654 490 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Tff2Q03404 129 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Grik5Q61626 979 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Cyp2c54Q6XVG2 490 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 GlyctkQ8QZY2 523 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 CrygnQ8VHL5 183 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Cyp2c50Q91X77 490 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Adgrf4Q9D2L6 698 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Cd274Q9EP73 290 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 FibpQ9JI19 357 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Fkbp1bQ9Z2I2 108 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Gm44511A0A0N4SW10 223 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Pcdha4O88689 947 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Klrb1bP27812 223 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Rnf207Q3V3A7 635 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Dhx32Q8BZS9 744 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Smc2Q8CG48 1191 aaKnown RBP34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Rbp7Q9EPC5 134 aa34.48■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Gm5737A0A140LI11 423 aa34.47■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 StamP70297 548 aa34.47■■■■□ 3.11
Ctdnep1-201ENSMUST00000108593 Cnnm3Q32NY4 713 aa34.47■■■■□ 3.11
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms