RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Gm43638A0A0J9YU36 694 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Kansl1lQ5DTI6 991 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 H2-Q4Q8HWB2 354 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Kbtbd4Q8R179 534 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Mtmr9Q9Z2D0 545 aa11.21□□□□□ -0.61
Ccdc38-201ENSMUST00000092215 Wdr78E9PYY5 807 aa11.21□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Mcph1Q7TT79 822 aa11.21□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Hsdl1Q8BTX9 330 aa11.21□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Kcnv2Q8CFS6 562 aa11.21□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Itm2cQ91VK4 269 aa11.21□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Snrnp35Q9D384 244 aa11.21□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pappa2E9PZ87 1789 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pcdhb15Q91Y04 786 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 ArP19091 899 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 RnpepQ8VCT3 650 aaKnown RBP11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 F11Q91Y47 624 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Nudt12Q9DCN1 462 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Upf1Q9EPU0 1124 aaKnown RBP11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pcdha4O88689 947 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pla2g6P97819 807 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 SobpQ0P5V2 864 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Foxn1Q61575 648 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Tmx3Q8BXZ1 456 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Trim32Q8CH72 655 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 2310002L09RikQ9D7L5 217 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 PdcQ9QW08 244 aa11.2□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pik3r1P26450 724 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Nbr1P97432 988 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Kiaa1211Q5PR69 1207 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Gas7Q60780 421 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Rusc1Q8BG26 893 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ehd2Q8BH64 543 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ddx39aQ8VDW0 427 aaKnown RBP11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Tmigd3G3X8R9 209 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 LtbrP50284 415 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Bach1P97302 739 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Wdr70Q3TWF6 657 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Slc16a10Q3U9N9 512 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Krt9Q6RHW0 743 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Olfr832Q7TRG9 312 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Micall1Q8BGT6 870 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pgm5Q8BZF8 567 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Havcr2Q8VIM0 281 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Cabp7Q91ZM8 215 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 JcadQ5DTX6 1320 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 PfasQ5SUR0 1337 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Skint7A7XV04 395 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Apol7aB2RT54 418 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 B020004C17RikJ3QP07 232 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Prom1O54990 867 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Trmt1Q3TX08 663 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Plekha7Q3UIL6 1118 aaKnown RBP11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 RragbQ6NTA4 374 aa11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pabpc6Q9D4E6 643 aaKnown RBP11.19□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Wdr33Q8K4P0 1330 aaKnown RBP11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Tmem63bQ3TWI9 832 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Meis1Q60954 390 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Gm11549A0A286YD83 63 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Mroh8E9PYI4 1049 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Krt78E9Q0F0 1068 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ece1Q4PZA2 769 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Srrm1Q52KI8 946 aaKnown RBP11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ccna1Q61456 421 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Sestd1Q80UK0 696 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Bcas3Q8CCN5 928 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ctu1Q99J10 420 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Kcnh7Q9ER47 1195 aa11.18□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Map7d1A2AJI0 846 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Itgb5O70309 798 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Syt2P46097 422 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pla2g4eQ50L42 875 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Grik5Q61626 979 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Entpd3Q8BFW6 529 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Anapc4Q91W96 807 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Trub2Q91WG3 331 aaKnown RBP11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Dnajc19Q9CQV7 116 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Tfr2Q9JKX3 798 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Stxbp4Q9WV89 557 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Specc1Q5SXY1 1067 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Trim47Q8C0E3 641 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Mmtag2Q99LX5 260 aaKnown RBP11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 4931400O07RikQ9D4M5 137 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Sgpp1Q9JI99 430 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Esr2O08537 530 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Pgk2P09041 417 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 GclcP97494 637 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Kiaa1468Q148V7 1216 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Arhgef16Q3U5C8 713 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Kcnj11Q61743 390 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Antxr2Q6DFX2 487 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Nap1l4Q78ZA7 375 aaKnown RBP11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Kri1Q8VDQ9 704 aaKnown RBP11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Snw1Q9CSN1 536 aaKnown RBP11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Plcb1Q9Z1B3 1216 aa11.17□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Nr1i2O54915 431 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ppp1r1bQ60829 194 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Hdac4Q6NZM9 1076 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Ifih1Q8R5F7 1025 aa11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Utp3Q9JI13 469 aaKnown RBP11.16□□□□□ -0.62
Ccdc38-201ENSMUST00000092215 Twf2Q9Z0P5 349 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms