RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Xpo6Q924Z6 1125 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 LpxnQ99N69 386 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Pramef12Q9D2F1 463 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Myo1hQ9D6A1 958 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Igsf9bE9PZ19 1328 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 MeiocA2AG06 965 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Ddx23D3Z0M9 819 aaKnown RBP13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Nr1i2O54915 431 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 D1Pas1P16381 660 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 ProcP33587 460 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Agap1Q8BXK8 857 aaKnown RBP13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Nup58Q8R332 587 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cwc25Q9DBF7 416 aa13.6□□□□□ -0.23
Trim23-201ENSMUST00000022225 FAM186AQ9D9R9 1790 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cd44P15379 778 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Epb41l4aP52963 686 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Gjb4Q02738 266 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cnnm2Q3TWN3 875 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 CcnjlQ5SRT8 387 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Ublcp1Q8BGR9 318 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Ces1dQ8VCT4 565 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cfap57Q9D180 1249 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 MymkQ9D1N4 221 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 4933428M09RikQ9D3X3 192 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Syce1Q9D495 329 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Sept14Q9DA97 430 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Dnajc10Q9DC23 793 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Acot3Q9QYR7 432 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Sorbs3Q9R1Z8 733 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Phf2Q9WTU0 1096 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Tjp2Q9Z0U1 1167 aaKnown RBP13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Mrc1Q61830 1456 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Fam186bD3Z420 943 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Atp2a2O55143 1044 aaKnown RBP13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cdh15P33146 784 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 PpardP35396 440 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Asap3Q5U464 904 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Kif1bpQ6ZPU9 617 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Ahcyl1Q80SW1 530 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 C2cd2lQ80X80 706 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Tarsl2Q8BLY2 790 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Sugp1Q8CH02 643 aaKnown RBP13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Exoc1Q8R3S6 894 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Q91WD4 421 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cdk9Q99J95 372 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Ndufb9Q9CQJ8 179 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cul1Q9WTX6 776 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 Cog1Q9Z160 980 aa13.59□□□□□ -0.23
Trim23-201ENSMUST00000022225 AfpP02772 605 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Tex35Q14BK3 207 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Txndc16Q7TN22 820 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Klhl7Q8BUL5 586 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Usp38Q8BW70 1042 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 C1qtnf12Q8R2Z0 308 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Spata1Q9D5R4 444 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Stard3nlQ9DCI3 235 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Znf394Q9Z1D9 521 aa13.58□□□□□ -0.23
Trim23-201ENSMUST00000022225 Crb1Q8VHS2 1405 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Pfkfb3A7UAK5 555 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 AK157302I3ITR1 129 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Parp2O88554 559 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Lmnb2P21619 596 aaKnown RBP13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ncoa4Q5U4H9 625 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Mapk6Q61532 720 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ccdc172Q810N9 267 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Gramd4Q8CB44 633 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Rpa1Q8VEE4 623 aaKnown RBP13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Isca1Q9D924 129 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Pkd2l2Q9JLG4 621 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 GsdmeQ9Z2D3 512 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ccdc6D3YZP9 469 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Pdzrn4E9PUZ9 1014 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Tcp10bE9PYJ0 438 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Gm5134E9QAB5 671 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 GckP52792 465 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Dab2P98078 766 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 SlmapQ3URD3 845 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Prpf38aQ4FK66 312 aaKnown RBP13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Sgsm3Q8VCZ6 750 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Spata17Q9D552 379 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Rexo2Q9D8S4 237 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Cmtr1Q9DBC3 837 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ube3bQ9ES34 1070 aa13.58□□□□□ -0.24
Trim23-201ENSMUST00000022225 Scgb2b7D3YYY1 112 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Sema3fO88632 785 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Acbd3Q8BMP6 525 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Terb1Q8C0V1 768 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 IntS13Q8QZV7 732 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Tsnaxip1Q99P25 704 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Prpf40aQ9R1C7 953 aaKnown RBP13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Cdhr2E9Q7P9 1308 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Mms22lB1AUR6 1238 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Pde4dQ01063 747 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Sap30bpQ02614 308 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Ttc7aQ8BGB2 858 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Haus1Q8BHX1 278 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Zdhhc14Q8BQQ1 489 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Tmco6Q8BQX5 494 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Akap11E9Q777 1895 aa13.57□□□□□ -0.24
Trim23-201ENSMUST00000022225 Bcl9lQ67FY2 1494 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms