RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 PsdQ5DTT2 1024 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Stxbp3Q60770 592 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Ces1eQ64176 562 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Asic1Q6NXK8 526 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Lrrc1Q80VQ1 524 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Nat10Q8K224 1024 aaKnown RBP11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Ppp2r5dQ91V89 594 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Dph6Q9CQ28 267 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 ThegQ9JMB1 375 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Gm5114W4VSN8 858 aa11.15□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Mia3Q8BI84 1930 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Clrn2B2RVW2 232 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Hap1O35668 628 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 EporP14753 507 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Kiaa1211Q5PR69 1207 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Hpcal4Q8BGZ1 191 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Gdap1l1Q8VE33 370 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Ankrd1Q9CR42 319 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 1700016G14RikA0A286YCZ6 238 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Kif23E9Q5G3 953 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Zfp408H7BX78 710 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Gjc1P28229 396 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Qrich1Q3UA37 777 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Znf18Q810A1 556 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Col23a1Q8K4G2 532 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Plekhg6Q8R0J1 787 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Herc3A6H6S0 1050 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Lig1P37913 916 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Evi5P97366 809 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Haus6Q6NV99 933 aaKnown RBP11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Tlr11Q6R5P0 926 aa11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Snd1Q78PY7 910 aaKnown RBP11.14□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Apol6B7ZC55 329 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Capn2O08529 700 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Api5O35841 504 aaKnown RBP11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Lrrc4bP0C192 709 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Tpm3P21107 285 aaKnown RBP11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Fam76aQ922G2 307 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 AacsQ9D2R0 672 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Zscan18E9PUD6 809 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Psg29Q3URN6 468 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 HrQ61645 1182 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Aggf1Q7TN31 711 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Kiaa1024Q8K3V7 917 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 HyiQ8R1F5 277 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Pcdhb5Q91XZ5 792 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Setd4P58467 439 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Jakmip3Q5DTN8 844 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Usp27Q8CEG8 438 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Vps33aQ9D2N9 598 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Cyp2s1Q9DBX6 501 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Cpne8Q9DC53 577 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Capn15Q9JLG8 1095 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Add1Q9QYC0 735 aaKnown RBP11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Myo5aQ99104 1853 aaKnown RBP11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Parp2O88554 559 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 BC051142Q3V0M8 400 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 CrkQ64010 304 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 PicalmQ7M6Y3 660 aaKnown RBP11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Tube1Q9D6T1 475 aa11.13□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Nr1i2O54915 431 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Trim43cP86449 446 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Tcp11Q01755 566 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Slc14a1Q8VHL0 384 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Galnt15Q9D2N8 638 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 4921524L21RikQ9D5T2 438 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Hoxa11P31311 313 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Muc3aQ3U5A2 218 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Dcaf8Q8N7N5 591 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Kctd10Q922M3 315 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Inpp4aQ9EPW0 939 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Tmem191cQ9JJB1 302 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Cbx8Q9QXV1 362 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Scgb2b11A0A087WR49 112 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 PurbO35295 324 aaKnown RBP11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Rufy4Q3TYX8 563 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 MaeaQ4VC33 396 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 AsnsQ61024 561 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Best3Q6H1V1 669 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Tmem39bQ810L4 492 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Iqcb1Q8BP00 598 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Fam111aQ9D2L9 613 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Gys1Q9Z1E4 738 aaKnown RBP11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Myo3bQ1EG27 1305 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Sned1Q70E20 1403 aa11.12□□□□□ -0.63
Rnft1-201ENSMUST00000020827 JcadQ5DTX6 1320 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Dhx37Q6NZL1 1150 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Rhbdf1Q6PIX5 856 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Ddx19bQ8BZY3 494 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 CsadQ9DBE0 493 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Rcan1Q9JHG6 198 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 ThbdP15306 577 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Sox10Q04888 466 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Trak2Q6P9N8 913 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Pip5kl1Q6U7H8 395 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Zmynd15Q8C0R7 736 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Ccdc38Q8CDN8 563 aa11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Rrp1bQ91YK2 724 aaKnown RBP11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 RnmtQ9D0L8 465 aaKnown RBP11.11□□□□□ -0.63
Rnft1-201ENSMUST00000020827 Cfap54Q8C6S9 3106 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms