RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A ADE6P38972 1358 aaKnown RBP11.42□□□□□ -0.58
TGA1tA(UGC)A RCM1P53972 490 aa11.42□□□□□ -0.58
TGA1tA(UGC)A PPH3P32345 308 aa11.41□□□□□ -0.58
TGA1tA(UGC)A PSK1P31374 1356 aa11.41□□□□□ -0.58
TGA1tA(UGC)A NAP1P25293 417 aaKnown RBP11.4□□□□□ -0.58
TGA1tA(UGC)A ENT1Q12518 454 aa11.39□□□□□ -0.59
TGA1tA(UGC)A YLR419WQ06698 1435 aaKnown RBP11.38□□□□□ -0.59
TGA1tA(UGC)A ENV9Q08651 330 aa11.37□□□□□ -0.59
TGA1tA(UGC)A SPE2P21182 396 aa11.34□□□□□ -0.59
TGA1tA(UGC)A YIL177CP40434 1758 aa11.33□□□□□ -0.59
TGA1tA(UGC)A YJL225CP40889 1758 aa11.33□□□□□ -0.59
TGA1tA(UGC)A URB1P34241 1764 aaKnown RBP11.33□□□□□ -0.6
TGA1tA(UGC)A KIP3P53086 805 aaKnown RBP11.31□□□□□ -0.6
TGA1tA(UGC)A YML133CQ03099 1374 aa11.3□□□□□ -0.6
TGA1tA(UGC)A YLL067CQ07888 1374 aa11.3□□□□□ -0.6
TGA1tA(UGC)A YLL066CQ99208 1374 aa11.3□□□□□ -0.6
TGA1tA(UGC)A YMR074CQ04773 145 aa11.3□□□□□ -0.6
TGA1tA(UGC)A IMH1Q06704 911 aaKnown RBP11.3□□□□□ -0.6
TGA1tA(UGC)A FKS3Q04952 1785 aa11.29□□□□□ -0.6
TGA1tA(UGC)A PRP45P28004 379 aaPredicted RBP11.29□□□□□ -0.6
TGA1tA(UGC)A PRP5P21372 849 aaPredicted RBP11.26□□□□□ -0.61
TGA1tA(UGC)A YRF1-3P0CX14 1859 aa11.25□□□□□ -0.61
TGA1tA(UGC)A YRF1-7P0CX15 1859 aa11.25□□□□□ -0.61
TGA1tA(UGC)A YRF1-6P53819 1859 aa11.25□□□□□ -0.61
TGA1tA(UGC)A PRP43P53131 767 aaKnown RBP11.25□□□□□ -0.61
TGA1tA(UGC)A MSB3P48566 633 aaPredicted RBP11.23□□□□□ -0.61
TGA1tA(UGC)A APC1P53886 1748 aa11.22□□□□□ -0.61
TGA1tA(UGC)A RSF2P46974 1380 aa11.2□□□□□ -0.62
TGA1tA(UGC)A MTR4P47047 1073 aaKnown RBP11.19□□□□□ -0.62
TGA1tA(UGC)A BUD31P25337 157 aaPredicted RBP11.18□□□□□ -0.62
TGA1tA(UGC)A MLP1Q02455 1875 aaKnown RBP11.18□□□□□ -0.62
TGA1tA(UGC)A LEU2P04173 364 aaPredicted RBP11.17□□□□□ -0.62
TGA1tA(UGC)A CHZ1P40019 153 aaPredicted RBP11.17□□□□□ -0.62
TGA1tA(UGC)A SLM3Q12093 417 aa11.15□□□□□ -0.62
TGA1tA(UGC)A ROM2P51862 1356 aaKnown RBP11.14□□□□□ -0.63
TGA1tA(UGC)A RPS24AP0CX31 135 aaKnown RBP11.12□□□□□ -0.63
TGA1tA(UGC)A RPS24BP0CX32 135 aaKnown RBP11.12□□□□□ -0.63
TGA1tA(UGC)A IES2P40154 320 aa11.12□□□□□ -0.63
TGA1tA(UGC)A EDE1P34216 1381 aa11.12□□□□□ -0.63
TGA1tA(UGC)A DOT5P40553 215 aa11.11□□□□□ -0.63
TGA1tA(UGC)A TCB1Q12466 1186 aa11.11□□□□□ -0.63
TGA1tA(UGC)A PRI1P10363 409 aa11.1□□□□□ -0.63
TGA1tA(UGC)A CSE4P36012 229 aa11.1□□□□□ -0.63
TGA1tA(UGC)A FKH1P40466 484 aa11.1□□□□□ -0.63
TGA1tA(UGC)A ORC1P54784 914 aaPredicted RBP11.09□□□□□ -0.63
TGA1tA(UGC)A SNF2P22082 1703 aa11.09□□□□□ -0.63
TGA1tA(UGC)A FOX2Q02207 900 aaKnown RBP11.08□□□□□ -0.64
TGA1tA(UGC)A AUS1Q08409 1394 aa11.06□□□□□ -0.64
TGA1tA(UGC)A SCT1P32784 759 aa11.05□□□□□ -0.64
TGA1tA(UGC)A RPN11P43588 306 aaKnown RBP11.05□□□□□ -0.64
TGA1tA(UGC)A XKS1P42826 600 aa11.03□□□□□ -0.64
TGA1tA(UGC)A SIR4P11978 1358 aa11.03□□□□□ -0.64
TGA1tA(UGC)A NPR2P39923 615 aa11.02□□□□□ -0.65
TGA1tA(UGC)A LEU3P08638 886 aa11.01□□□□□ -0.65
TGA1tA(UGC)A MHP1P43638 1398 aa11.01□□□□□ -0.65
TGA1tA(UGC)A YEF3P16521 1044 aaKnown RBP10.99□□□□□ -0.65
TGA1tA(UGC)A UBP1P25037 809 aa10.99□□□□□ -0.65
TGA1tA(UGC)A RTG3P38165 486 aa10.99□□□□□ -0.65
TGA1tA(UGC)A PDI1P17967 522 aaKnown RBP10.98□□□□□ -0.65
TGA1tA(UGC)A YKL133CP36066 463 aa10.98□□□□□ -0.65
TGA1tA(UGC)A YKR075CP36155 307 aa10.98□□□□□ -0.65
TGA1tA(UGC)A RIM15P43565 1770 aa10.98□□□□□ -0.65
TGA1tA(UGC)A TAP42Q04372 366 aa10.97□□□□□ -0.65
TGA1tA(UGC)A SEC3P33332 1336 aaKnown RBP10.96□□□□□ -0.65
TGA1tA(UGC)A DPS1P04802 557 aaKnown RBP10.96□□□□□ -0.65
TGA1tA(UGC)A YRF1-4O13559 1382 aa10.95□□□□□ -0.66
TGA1tA(UGC)A COBP00163 385 aa10.94□□□□□ -0.66
TGA1tA(UGC)A GAS4Q08271 471 aa10.94□□□□□ -0.66
TGA1tA(UGC)A YBL086CP38177 466 aa10.93□□□□□ -0.66
TGA1tA(UGC)A GTT3P39996 337 aa10.93□□□□□ -0.66
TGA1tA(UGC)A LYS4P49367 693 aaPredicted RBP10.93□□□□□ -0.66
TGA1tA(UGC)A RTF1P53064 558 aa10.93□□□□□ -0.66
TGA1tA(UGC)A GRX4P32642 244 aa10.92□□□□□ -0.66
TGA1tA(UGC)A CTH1P47976 325 aa10.92□□□□□ -0.66
TGA1tA(UGC)A RCR1P38212 213 aa10.91□□□□□ -0.66
TGA1tA(UGC)A ENP1P38333 483 aaKnown RBP10.91□□□□□ -0.66
TGA1tA(UGC)A ADE16P54113 591 aaKnown RBP10.9□□□□□ -0.66
TGA1tA(UGC)A FRK1Q03002 865 aaPredicted RBP10.89□□□□□ -0.67
TGA1tA(UGC)A PDS5Q04264 1277 aa10.89□□□□□ -0.67
TGA1tA(UGC)A HIM1Q06674 414 aa10.89□□□□□ -0.67
TGA1tA(UGC)A LAM6Q08001 693 aa10.89□□□□□ -0.67
TGA1tA(UGC)A RPO41P13433 1351 aaKnown RBP10.89□□□□□ -0.67
TGA1tA(UGC)A PRP40P33203 583 aaKnown RBP10.88□□□□□ -0.67
TGA1tA(UGC)A POL5P39985 1022 aaKnown RBP10.88□□□□□ -0.67
TGA1tA(UGC)A YJL181WP46987 611 aa10.86□□□□□ -0.67
TGA1tA(UGC)A MEC3Q02574 474 aa10.86□□□□□ -0.67
TGA1tA(UGC)A SSA2P10592 639 aaKnown RBP10.85□□□□□ -0.67
TGA1tA(UGC)A ALD2P47771 506 aa10.83□□□□□ -0.68
TGA1tA(UGC)A INP54Q08227 384 aaKnown RBP10.83□□□□□ -0.68
TGA1tA(UGC)A UGA2P38067 497 aa10.82□□□□□ -0.68
TGA1tA(UGC)A NST1P53935 1240 aa10.82□□□□□ -0.68
TGA1tA(UGC)A KAR2P16474 682 aaKnown RBP10.78□□□□□ -0.68
TGA1tA(UGC)A TRK1P12685 1235 aa10.77□□□□□ -0.69
TGA1tA(UGC)A BDF1P35817 686 aa10.77□□□□□ -0.69
TGA1tA(UGC)A SPT7P35177 1332 aa10.77□□□□□ -0.69
TGA1tA(UGC)A OSM1P21375 501 aaKnown RBP10.76□□□□□ -0.69
TGA1tA(UGC)A NUP145P49687 1317 aa10.76□□□□□ -0.69
TGA1tA(UGC)A DSD1P53095 428 aa10.75□□□□□ -0.69
TGA1tA(UGC)A MSB4Q12317 492 aa10.75□□□□□ -0.69
TGA1tA(UGC)A BUB1P41695 1021 aaKnown RBP RIP-Chip data10.74□□□□□ -0.69not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms