RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 SEC2P17065 759 aa5.15□□□□□ -1.59
snR55snR55 LAM6Q08001 693 aa5.13□□□□□ -1.59
snR55snR55 ERG12P07277 443 aa5.12□□□□□ -1.59
snR55snR55 MVP1P40959 511 aaKnown RBP5.11□□□□□ -1.59
snR55snR55 BRE2P43132 505 aa5.11□□□□□ -1.59
snR55snR55 YPL062WQ02781 134 aa5.11□□□□□ -1.59
snR55snR55 GCD11P32481 527 aaKnown RBP5.1□□□□□ -1.59
snR55snR55 COX6P00427 148 aa5.09□□□□□ -1.59
snR55snR55 NPL4P33755 580 aa5.09□□□□□ -1.59
snR55snR55 RGR1P19263 1082 aa5.08□□□□□ -1.6
snR55snR55 VPS70P47161 811 aa5.08□□□□□ -1.6
snR55snR55 YPR109WQ06104 294 aa5.07□□□□□ -1.6
snR55snR55 MAK21Q12176 1025 aaKnown RBP5.07□□□□□ -1.6
snR55snR55 SPT16P32558 1035 aaKnown RBP5.06□□□□□ -1.6
snR55snR55 RRN7P40992 514 aa5.06□□□□□ -1.6
snR55snR55 BDP1P46678 594 aa5.06□□□□□ -1.6
snR55snR55 FRK1Q03002 865 aaPredicted RBP5.06□□□□□ -1.6
snR55snR55 CDC4P07834 779 aa5.04□□□□□ -1.6
snR55snR55 ERF2Q06551 359 aa5.04□□□□□ -1.6
snR55snR55 KEX2P13134 814 aa5.02□□□□□ -1.61
snR55snR55 GCR2Q01722 534 aa5.02□□□□□ -1.61
snR55snR55 GAR1P28007 205 aaKnown RBP5.01□□□□□ -1.61
snR55snR55 HED1Q03937 162 aa5□□□□□ -1.61
snR55snR55 MOD5P07884 428 aa4.99□□□□□ -1.61
snR55snR55 MET22P32179 357 aa4.99□□□□□ -1.61
snR55snR55 PAC1P39946 494 aaKnown RBP4.99□□□□□ -1.61
snR55snR55 AGE1Q04412 482 aa4.98□□□□□ -1.61
snR55snR55 PAT1P25644 796 aaKnown RBP4.97□□□□□ -1.61
snR55snR55 MET32Q12041 191 aa4.97□□□□□ -1.61
snR55snR55 ENV9Q08651 330 aa4.96□□□□□ -1.62
snR55snR55 PSE1P32337 1089 aaKnown RBP4.95□□□□□ -1.62
snR55snR55 GBP2P25555 427 aaKnown RBP RIP-Chip data4.94□□□□□ -1.62not detected
snR55snR55 PBS2P08018 668 aa4.93□□□□□ -1.62
snR55snR55 TUB4P53378 473 aa4.93□□□□□ -1.62
snR55snR55 ASH1P34233 588 aa4.92□□□□□ -1.62
snR55snR55 PUS5Q06244 254 aa4.92□□□□□ -1.62
snR55snR55 AFT1P22149 690 aa4.91□□□□□ -1.62
snR55snR55 YDR444WQ04093 687 aa4.91□□□□□ -1.62
snR55snR55 YDL176WQ12027 708 aa4.9□□□□□ -1.63
snR55snR55 CLB5P30283 435 aa4.89□□□□□ -1.63
snR55snR55 CKB1P43639 278 aa4.89□□□□□ -1.63
snR55snR55 RTF1P53064 558 aa4.89□□□□□ -1.63
snR55snR55 LCB5Q06147 687 aaKnown RBP4.89□□□□□ -1.63
snR55snR55 SIT4P20604 311 aa4.88□□□□□ -1.63
snR55snR55 YNL115CP53925 644 aa4.87□□□□□ -1.63
snR55snR55 RRD1P40454 393 aaKnown RBP4.86□□□□□ -1.63
snR55snR55 HST3P53687 447 aa4.86□□□□□ -1.63
snR55snR55 MAM3Q12296 706 aa4.86□□□□□ -1.63
snR55snR55 TPD3P31383 635 aa4.85□□□□□ -1.63
snR55snR55 DSF2P38213 736 aa4.85□□□□□ -1.63
snR55snR55 IES2P40154 320 aa4.85□□□□□ -1.63
snR55snR55 YJR115WP47152 169 aa4.85□□□□□ -1.63
snR55snR55 NUP42P49686 430 aaKnown RBP4.84□□□□□ -1.63
snR55snR55 NIS1P53939 407 aa4.84□□□□□ -1.63
snR55snR55 PDC1P06169 563 aaKnown RBP4.82□□□□□ -1.64
snR55snR55 HXT10P43581 546 aa4.82□□□□□ -1.64
snR55snR55 TEA1P47988 759 aa4.81□□□□□ -1.64
snR55snR55 MSB3P48566 633 aaPredicted RBP4.8□□□□□ -1.64
snR55snR55 KXD1P53158 218 aa4.8□□□□□ -1.64
snR55snR55 SAS10Q12136 610 aaPredicted RBP4.79□□□□□ -1.64
snR55snR55 DIT2P21595 489 aa4.78□□□□□ -1.64
snR55snR55 SYH1Q02875 849 aaKnown RBP4.78□□□□□ -1.64
snR55snR55 SLY41P22215 453 aa4.77□□□□□ -1.65
snR55snR55 FPK1P53739 893 aa4.77□□□□□ -1.65
snR55snR55 ACO2P39533 789 aa4.75□□□□□ -1.65
snR55snR55 PTK2P47116 818 aaKnown RBP4.75□□□□□ -1.65
snR55snR55 CAF120P53836 1060 aa4.75□□□□□ -1.65
snR55snR55 RPA14P50106 137 aa4.74□□□□□ -1.65
snR55snR55 OPT2Q06593 877 aa4.74□□□□□ -1.65
snR55snR55 YPR097WQ06839 1073 aa4.74□□□□□ -1.65
snR55snR55 YDL206WQ12424 762 aa4.74□□□□□ -1.65
snR55snR55 UGA3P26370 528 aa4.73□□□□□ -1.65
snR55snR55 MRT4P33201 236 aaKnown RBP4.73□□□□□ -1.65
snR55snR55 ALR1Q08269 859 aa4.73□□□□□ -1.65
snR55snR55 SCJ1P25303 377 aa4.72□□□□□ -1.65
snR55snR55 PUS6P53294 404 aa4.72□□□□□ -1.65
snR55snR55 TRM1P15565 570 aaKnown RBP4.71□□□□□ -1.66
snR55snR55 YMR196WQ04336 1088 aa4.71□□□□□ -1.66
snR55snR55 KIP2P28743 706 aa4.7□□□□□ -1.66
snR55snR55 HST2P53686 357 aa4.7□□□□□ -1.66
snR55snR55 TBF1Q02457 562 aa4.7□□□□□ -1.66
snR55snR55 IXR1P33417 597 aa4.69□□□□□ -1.66
snR55snR55 GLY1P37303 387 aaKnown RBP4.69□□□□□ -1.66
snR55snR55 YIR007WP40566 764 aa4.68□□□□□ -1.66
snR55snR55 BUB1P41695 1021 aaKnown RBP RIP-Chip data4.68□□□□□ -1.66not detected
snR55snR55 NUP85P46673 744 aa4.68□□□□□ -1.66
snR55snR55 SRF1Q12516 437 aa4.68□□□□□ -1.66
snR55snR55 SPB4P25808 606 aaPredicted RBP4.67□□□□□ -1.66
snR55snR55 TY1A-BLQ12266 440 aa4.67□□□□□ -1.66
snR55snR55 DMA1P38823 416 aa4.66□□□□□ -1.66
snR55snR55 YLR346CQ06139 101 aa4.66□□□□□ -1.66
snR55snR55 VAC17P25591 423 aa4.65□□□□□ -1.67
snR55snR55 TRK2P28584 889 aa4.65□□□□□ -1.67
snR55snR55 TYW1Q08960 810 aaKnown RBP4.65□□□□□ -1.67
snR55snR55 MMP1Q12372 583 aa4.65□□□□□ -1.67
snR55snR55 MIP1P15801 1254 aa4.64□□□□□ -1.67
snR55snR55 YBL086CP38177 466 aa4.64□□□□□ -1.67
snR55snR55 RTT106P40161 455 aa4.64□□□□□ -1.67
snR55snR55 SCW11P53189 542 aa4.64□□□□□ -1.67
snR55snR55 YGR035CP53222 116 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms