RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 GCD11P32481 527 aaKnown RBP2.19□□□□□ -2.06
snR38snR38 STR2P47164 639 aa2.19□□□□□ -2.06
snR38snR38 DPH6Q12429 685 aa2.19□□□□□ -2.06
snR38snR38 SRF1Q12516 437 aa2.19□□□□□ -2.06
snR38snR38 NUD1P32336 851 aa2.18□□□□□ -2.06
snR38snR38 ISM1P48526 1002 aa2.18□□□□□ -2.06
snR38snR38 MET32Q12041 191 aa2.18□□□□□ -2.06
snR38snR38 YRR1Q12172 810 aa2.18□□□□□ -2.06
snR38snR38 RRN7P40992 514 aa2.17□□□□□ -2.06
snR38snR38 MSB3P48566 633 aaPredicted RBP2.17□□□□□ -2.06
snR38snR38 SCW11P53189 542 aa2.17□□□□□ -2.06
snR38snR38 OPT2Q06593 877 aa2.17□□□□□ -2.06
snR38snR38 GLY1P37303 387 aaKnown RBP2.16□□□□□ -2.06
snR38snR38 YIR007WP40566 764 aa2.16□□□□□ -2.06
snR38snR38 UGA3P26370 528 aa2.14□□□□□ -2.07
snR38snR38 RAM2P29703 316 aa2.14□□□□□ -2.07
snR38snR38 NSG2P53898 299 aa2.14□□□□□ -2.07
snR38snR38 TFB4Q12004 338 aa2.14□□□□□ -2.07
snR38snR38 MIP1P15801 1254 aa2.13□□□□□ -2.07
snR38snR38 RAD54P32863 898 aa2.13□□□□□ -2.07
snR38snR38 CCT8P47079 568 aaKnown RBP2.13□□□□□ -2.07
snR38snR38 TYW1Q08960 810 aaKnown RBP2.13□□□□□ -2.07
snR38snR38 CSC1Q06538 782 aa2.12□□□□□ -2.07
snR38snR38 TUM1Q08686 304 aaKnown RBP2.12□□□□□ -2.07
snR38snR38 MDJ1P35191 511 aa2.11□□□□□ -2.07
snR38snR38 IFH1P39520 1085 aa2.11□□□□□ -2.07
snR38snR38 PTK2P47116 818 aaKnown RBP2.11□□□□□ -2.07
snR38snR38 LYS5P50113 272 aa2.11□□□□□ -2.07
snR38snR38 TY1A-DR4O74302 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-HP0C2I4 478 aaKnown RBP2.1□□□□□ -2.07
snR38snR38 TY1A-AP0CX57 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-PR1P0CX58 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-ORP0CX59 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-PR2P0CX60 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-DR5P0CX65 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-ER2P0CX66 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-GR3P0CX67 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-LR1P0CX68 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-MR2P0CX69 440 aa2.1□□□□□ -2.07
snR38snR38 SEC2P17065 759 aa2.1□□□□□ -2.07
snR38snR38 NUP85P46673 744 aa2.1□□□□□ -2.07
snR38snR38 TY1A-JR2P47099 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-DR1Q03856 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-ML1Q04706 440 aaKnown RBP2.1□□□□□ -2.07
snR38snR38 TY1A-BRQ12217 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-BLQ12266 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-NL2Q12470 440 aa2.1□□□□□ -2.07
snR38snR38 TY1A-GR2Q12485 440 aa2.1□□□□□ -2.07
snR38snR38 PCS60P38137 543 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
snR38snR38 KIC1P38692 1080 aa2.09□□□□□ -2.07
snR38snR38 RTT106P40161 455 aa2.09□□□□□ -2.07
snR38snR38 UBP2Q01476 1272 aa2.09□□□□□ -2.07
snR38snR38 IRC24P40580 263 aa2.08□□□□□ -2.08
snR38snR38 YLR326WQ06170 240 aaKnown RBP2.08□□□□□ -2.08
snR38snR38 YPR053CQ6Q5F3 151 aa2.08□□□□□ -2.08
snR38snR38 AI1P03875 834 aa2.07□□□□□ -2.08
snR38snR38 THI72Q08579 599 aa2.07□□□□□ -2.08
snR38snR38 GLT1Q12680 2145 aaKnown RBP2.07□□□□□ -2.08
snR38snR38 VHR2P40041 505 aa2.06□□□□□ -2.08
snR38snR38 SYH1Q02875 849 aaKnown RBP2.06□□□□□ -2.08
snR38snR38 PUS5Q06244 254 aa2.06□□□□□ -2.08
snR38snR38 UBP14P38237 781 aaKnown RBP2.05□□□□□ -2.08
snR38snR38 JJJ3P47138 172 aa2.05□□□□□ -2.08
snR38snR38 LSC2P53312 427 aa2.05□□□□□ -2.08
snR38snR38 MOD5P07884 428 aa2.04□□□□□ -2.08
snR38snR38 MAC1P35192 417 aa2.04□□□□□ -2.08
snR38snR38 GAP1P19145 602 aaPredicted RBP2.03□□□□□ -2.08
snR38snR38 ROG3P43602 733 aa2.03□□□□□ -2.08
snR38snR38 YPL034WQ03083 165 aa2.02□□□□□ -2.09
snR38snR38 TY1A-MR1Q04215 440 aa2.02□□□□□ -2.09
snR38snR38 ARG82P07250 355 aa2.01□□□□□ -2.09
snR38snR38 SKN7P38889 622 aa2.01□□□□□ -2.09
snR38snR38 YMR187CQ03236 431 aa2.01□□□□□ -2.09
snR38snR38 PAC1P39946 494 aaKnown RBP2□□□□□ -2.09
snR38snR38 KXD1P53158 218 aa2□□□□□ -2.09
snR38snR38 YFL066CP43538 392 aa1.99□□□□□ -2.09
snR38snR38 KIP2P28743 706 aa1.98□□□□□ -2.09
snR38snR38 OSH7P38755 437 aa1.98□□□□□ -2.09
snR38snR38 KEX2P13134 814 aa1.97□□□□□ -2.09
snR38snR38 TPD3P31383 635 aa1.97□□□□□ -2.09
snR38snR38 ADE12P80210 433 aaKnown RBP1.96□□□□□ -2.1
snR38snR38 TCB1Q12466 1186 aa1.96□□□□□ -2.1
snR38snR38 AAD14P42884 376 aa1.95□□□□□ -2.1
snR38snR38 TUB4P53378 473 aa1.95□□□□□ -2.1
snR38snR38 TDA6Q06466 467 aa1.95□□□□□ -2.1
snR38snR38 CCP1P00431 361 aa1.94□□□□□ -2.1
snR38snR38 MRT4P33201 236 aaKnown RBP1.94□□□□□ -2.1
snR38snR38 MVP1P40959 511 aaKnown RBP1.94□□□□□ -2.1
snR38snR38 HXT10P43581 546 aa1.94□□□□□ -2.1
snR38snR38 YJR098CP47139 656 aa1.94□□□□□ -2.1
snR38snR38 YPR109WQ06104 294 aa1.94□□□□□ -2.1
snR38snR38 IXR1P33417 597 aa1.93□□□□□ -2.1
snR38snR38 CEM1P39525 442 aa1.93□□□□□ -2.1
snR38snR38 YNR014WP53719 212 aa1.93□□□□□ -2.1
snR38snR38 GIS1Q03833 894 aa1.93□□□□□ -2.1
snR38snR38 ORC6P38826 435 aa1.92□□□□□ -2.1
snR38snR38 YDR090CQ03193 310 aa1.92□□□□□ -2.1
snR38snR38 DLD1P32891 587 aa1.91□□□□□ -2.1
snR38snR38 MCX1P38323 520 aaPredicted RBP1.91□□□□□ -2.1
snR38snR38 SET1P38827 1080 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms